RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CTTNQ14247 550 aaKnown RBP7.89□□□□□ -1.15
VCAN-207ENST00000507162 SMAD1Q15797 465 aaKnown RBP7.89□□□□□ -1.15
VCAN-207ENST00000507162 Q4G0T1 1027 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 SYCP2LQ5T4T6 812 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 CENPPQ6IPU0 288 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 B4GALNT3Q6L9W6 998 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 B3GNT9Q6UX72 402 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 SGMS1Q86VZ5 419 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 SLC41A1Q8IVJ1 513 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 SPACA3Q8IXA5 215 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 TTC9BQ8N6N2 239 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 GIPC2Q8TF65 315 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 FGF11Q92914 225 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 ERLEC1Q96DZ1 483 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 FAM117AQ9C073 453 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 ZDHHC5Q9C0B5 715 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 ZMYND12Q9H0C1 365 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 LINC00597Q9H2U6 94 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 ZDHHC4Q9NPG8 344 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 TM7SF3Q9NS93 570 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 PRMT7Q9NVM4 692 aaPredicted RBP7.89□□□□□ -1.15
VCAN-207ENST00000507162 RGL1Q9NZL6 768 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 RCAN3Q9UKA8 241 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 NAP1L2Q9ULW6 460 aaPredicted RBP7.89□□□□□ -1.15
VCAN-207ENST00000507162 WNT6Q9Y6F9 365 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 POLQO75417 2590 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 TNFSF14O43557 240 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 NDUFS2O75306 463 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 CILPO75339 1184 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 DKK1O94907 266 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 TDP2O95551 362 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 NMT1P30419 496 aaKnown RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 YARSP54577 528 aaKnown RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 OSTNP61366 133 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 MRPS21P82921 87 aaKnown RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 VEPH1Q14D04 833 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 PFKFB3Q16875 520 aaPredicted RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 EOGTQ5NDL2 527 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 EEF1DP3Q658K8 133 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 TXNDC8Q6A555 127 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 PPP4R3AQ6IN85 833 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 USP37Q86T82 979 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 TMPRSS12Q86WS5 348 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 SFTPA1Q8IWL2 248 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 ZBTB8OSQ8IWT0 167 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 TPH2Q8IWU9 490 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 C4orf19Q8IY42 314 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 ZNF513Q8N8E2 541 aaPredicted RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 IL17RCQ8NAC3 791 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 BEST2Q8NFU1 509 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 RIN3Q8TB24 985 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 BICD2Q8TD16 824 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 TBCKQ8TEA7 893 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 CCDC12Q8WUD4 166 aaPredicted RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 ATP2A3Q93084 1043 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 MED8Q96G25 268 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 DYDC2Q96IM9 177 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 SUSD3Q96L08 255 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 HS3ST6Q96QI5 342 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 SEPT5Q99719 369 aaPredicted RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 LXNQ9BS40 222 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 MTA3Q9BTC8 594 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 POLR3FQ9H1D9 316 aaPredicted RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 MIR1-1HGQ9H1L0 117 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 CPNE5Q9HCH3 593 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 SUSD2Q9UGT4 822 aa7.88□□□□□ -1.15
VCAN-207ENST00000507162 USP9YO00507 2555 aaPredicted RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 MYO18AQ92614 2054 aaKnown RBP7.88□□□□□ -1.15
VCAN-207ENST00000507162 NBASA2RRP1 2371 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 A0A087WWV3 80 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 ESYT2A0FGR8 921 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 GOLGA8AA7E2F4 631 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 GOLGA8BA8MQT2 603 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 CCER2I3L3R5 266 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 ZBTB24O43167 697 aaPredicted RBP7.87□□□□□ -1.15
VCAN-207ENST00000507162 ZBTB43O43298 467 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 MYF5P13349 255 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 HSPA4P34932 840 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 OPRD1P41143 372 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 MATKP42679 507 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 YWHAHQ04917 246 aaPredicted RBP7.87□□□□□ -1.15
VCAN-207ENST00000507162 SCRN1Q12765 414 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 NFATC3Q12968 1075 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 TARDBPQ13148 414 aaKnown RBP eCLIP7.87□□□□□ -1.15
VCAN-207ENST00000507162 GPR17Q13304 367 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 MTF1Q14872 753 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 HLA-BQ31612 363 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 MGAT5BQ3V5L5 792 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 WDR45BQ5MNZ6 344 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 C6orf132Q5T0Z8 1188 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 BROXQ5VW32 411 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 ZNF574Q6ZN55 896 aaPredicted RBP7.87□□□□□ -1.15
VCAN-207ENST00000507162 EFCAB13Q8IY85 973 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 ETNPPLQ8TBG4 499 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 OSCP1Q8WVF1 389 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 C18orf25Q96B23 403 aaPredicted RBP7.87□□□□□ -1.15
VCAN-207ENST00000507162 TMEM176AQ96HP8 235 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 PRIMPOLQ96LW4 560 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms