RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 POF1BQ8WVV4 589 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 ZNF558Q96NG5 402 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 FAM193BQ96PV7 902 aaPredicted RBP10.34□□□□□ -0.75
CLCN3-205ENST00000506924 C7orf25Q9BPX7 421 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 C11orf84Q9BUA3 381 aaPredicted RBP10.34□□□□□ -0.75
CLCN3-205ENST00000506924 MRPL9Q9BYD2 267 aaKnown RBP10.34□□□□□ -0.75
CLCN3-205ENST00000506924 LRRC27Q9C0I9 530 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 PTPRHQ9HD43 1115 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 UBN1Q9NPG3 1134 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 GIT1Q9Y2X7 761 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 RWDD3Q9Y3V2 267 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 PLXNA4Q9HCM2 1894 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 FRMD3A2A2Y4 597 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 F8W810 466 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 HNRNPDLO14979 420 aaKnown RBP10.33□□□□□ -0.76
CLCN3-205ENST00000506924 CLDN3O15551 220 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 TOM1L1O75674 476 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 ZNF202O95125 648 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 WISP1O95388 367 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 RB1P06400 928 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 PROZP22891 400 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 OR1G1P47890 313 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 SLC11A1P49279 550 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 ALDH7A1P49419 539 aaKnown RBP10.33□□□□□ -0.76
CLCN3-205ENST00000506924 GTF2BQ00403 316 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 NOLC1Q14978 699 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLCN3-205ENST00000506924 GLRA4Q5JXX5 417 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 ZBTB41Q5SVQ8 909 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 ANKRD34AQ69YU3 496 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 SLC39A4Q6P5W5 647 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 HS2ST1Q7LGA3 356 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 CD163Q86VB7 1156 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 GSTCDQ8NEC7 633 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 BCL7CQ8WUZ0 217 aaPredicted RBP10.33□□□□□ -0.76
CLCN3-205ENST00000506924 RPS6KC1Q96S38 1066 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 CEP41Q9BYV8 373 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 MAGEF1Q9HAY2 307 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 SEL1LQ9UBV2 794 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 PRG3Q9Y2Y8 225 aaPredicted RBP10.33□□□□□ -0.76
CLCN3-205ENST00000506924 EYSQ5T1H1 3165 aa10.33□□□□□ -0.76
CLCN3-205ENST00000506924 TDRD15B5MCY1 1934 aaKnown RBP10.33□□□□□ -0.76
CLCN3-205ENST00000506924 PRRC2BQ5JSZ5 2229 aaKnown RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 CASTOR2A6NHX0 329 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 PTGESO14684 152 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 NRP1O14786 923 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 MEFVO15553 781 aaPredicted RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 PAGE1O75459 146 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 GALTP07902 379 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 MCF2P10911 925 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 CA8P35219 290 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 TNFSF9P41273 254 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 LIG3P49916 1009 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 ERVFC1P60507 584 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 SPAG1Q07617 926 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 CAMK1Q14012 370 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 PTPROQ16827 1216 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 LLGL2Q6P1M3 1020 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 ZPBP2Q6X784 338 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 KRBA2Q6ZNG9 492 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 UNC13DQ70J99 1090 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 ERMP1Q7Z2K6 904 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 APBB1IPQ7Z5R6 666 aaPredicted RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 COLGALT2Q8IYK4 626 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 SYCP3Q8IZU3 236 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 SLC39A11Q8N1S5 342 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 MICAL1Q8TDZ2 1067 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 NOC3LQ8WTT2 800 aaKnown RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 WFDC12Q8WWY7 111 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 ERCC4Q92889 916 aaPredicted RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 P2RX5Q93086 422 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 MRPL38Q96DV4 380 aaKnown RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 IPO9Q96P70 1041 aaKnown RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 ACCSQ96QU6 501 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 PAAF1Q9BRP4 392 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 PYM1Q9BRP8 204 aaKnown RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 CCDC94Q9BW85 323 aaPredicted RBP10.32□□□□□ -0.76
CLCN3-205ENST00000506924 CYP4F12Q9HCS2 524 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 SLC39A2Q9NP94 309 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 SPG21Q9NZD8 308 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 FAN1Q9Y2M0 1017 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 ATG2AQ2TAZ0 1938 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 TRIP11Q15643 1979 aa10.32□□□□□ -0.76
CLCN3-205ENST00000506924 TRANK1O15050 2925 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 COL6A3P12111 3177 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 REV3LO60673 3130 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 C1QTNF9BB2RNN3 333 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 KLRC4O43908 158 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 ALDH2P05091 517 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 CXCL8P10145 99 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLCN3-205ENST00000506924 CHRNA4P43681 627 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 ACOT2P49753 483 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 YARSP54577 528 aaKnown RBP10.31□□□□□ -0.76
CLCN3-205ENST00000506924 FANCCQ00597 558 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 MCL1Q07820 350 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 TCEAL5Q5H9L2 206 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 FAM26FQ5R3K3 315 aa10.31□□□□□ -0.76
CLCN3-205ENST00000506924 L1TD1Q5T7N2 865 aaKnown RBP10.31□□□□□ -0.76
CLCN3-205ENST00000506924 PLPP4Q5VZY2 271 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms