RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
SIL1-208ENST00000505945 DCDC2BA2VCK2 349 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 OTOL1A6NHN0 477 aaPredicted RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 RETP07949 1114 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 IDEP14735 1019 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 GAP43P17677 238 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 ACAT1P24752 427 aaKnown RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 AVPR1AP37288 418 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 PNPLA4P41247 253 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 TSPY1Q01534 308 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 CUL4AQ13619 759 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 DDR2Q16832 855 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 L1TD1Q5T7N2 865 aaKnown RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 TRIM68Q6AZZ1 485 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 LONP2Q86WA8 852 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 BRSK2Q8IWQ3 736 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 SYCP3Q8IZU3 236 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 PDCL2Q8N4E4 241 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 CSGALNACT2Q8N6G5 542 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 C1orf127Q8N9H9 656 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 CACTINQ8WUQ7 758 aaKnown RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 ATG2BQ96BY7 2078 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 ZNF560Q96MR9 790 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 FAM83CQ9BQN1 747 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 EBF3Q9H4W6 596 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 PCIF1Q9H4Z3 704 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 DDX43Q9NXZ2 648 aaKnown RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 RBAKQ9NYW8 714 aaPredicted RBP12.24□□□□□ -0.45
SIL1-208ENST00000505945 L1RE1Q9UN81 338 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 EPG5Q9HCE0 2579 aa12.24□□□□□ -0.45
SIL1-208ENST00000505945 EXTL3O43909 919 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 HUS1O60921 280 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 LDHAP00338 332 aaKnown RBP12.23□□□□□ -0.45
SIL1-208ENST00000505945 CENPBP07199 599 aaPredicted RBP12.23□□□□□ -0.45
SIL1-208ENST00000505945 KRT19P08727 400 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 PDCP20941 246 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 CYP2F1P24903 491 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 CNR2P34972 360 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 TXLNAP40222 546 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 BFSP1Q12934 665 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 RESTQ13127 1097 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 RUNX3Q13761 415 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 NFE2Q16621 373 aaPredicted RBP12.23□□□□□ -0.45
SIL1-208ENST00000505945 PKN3Q6P5Z2 889 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 SYNPOQ8N3V7 929 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 CXorf38Q8TB03 319 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 RIN3Q8TB24 985 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 NOC3LQ8WTT2 800 aaKnown RBP12.23□□□□□ -0.45
SIL1-208ENST00000505945 MRPS31Q92665 395 aaKnown RBP12.23□□□□□ -0.45
SIL1-208ENST00000505945 ACBD6Q9BR61 282 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 CBWD1Q9BRT8 395 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 FGFBP2Q9BYJ0 223 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 PDE11AQ9HCR9 933 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 HPS4Q9NQG7 708 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 OLFML3Q9NRN5 406 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 TDP1Q9NUW8 608 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 ZMYM5Q9UJ78 669 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 GTF3C4Q9UKN8 822 aa12.23□□□□□ -0.45
SIL1-208ENST00000505945 ZNF638Q14966 1978 aaKnown RBP12.23□□□□□ -0.45
SIL1-208ENST00000505945 ACACBO00763 2458 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 RALGAPA1Q6GYQ0 2036 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 DENND4CQ5VZ89 1909 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 A0A087X0B3 334 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.22□□□□□ -0.45
SIL1-208ENST00000505945 HCRTO43612 131 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 PRPF6O94906 941 aaKnown RBP12.22□□□□□ -0.45
SIL1-208ENST00000505945 CSH1P0DML2 217 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 CSH2P0DML3 217 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 ARSAP15289 507 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 SYT1P21579 422 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 GARTP22102 1010 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 HOXA6P31267 233 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 STAT6P42226 847 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 PXNP49023 591 aaPredicted RBP12.22□□□□□ -0.45
SIL1-208ENST00000505945 CCDC142Q17RM4 750 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 FSTL4Q6MZW2 842 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 CCDC73Q6ZRK6 1079 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 CEP68Q76N32 757 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.22□□□□□ -0.45
SIL1-208ENST00000505945 MON1AQ86VX9 555 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 TMEM86AQ8N2M4 240 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 FAM160A2Q8N612 972 aaPredicted RBP12.22□□□□□ -0.45
SIL1-208ENST00000505945 LRRC52Q8N7C0 313 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 CHFRQ96EP1 664 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 CYP2S1Q96SQ9 504 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 RTKNQ9BST9 563 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 FBRSL1Q9HCM7 1045 aaKnown RBP12.22□□□□□ -0.45
SIL1-208ENST00000505945 SEMA4GQ9NTN9 838 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 PANK4Q9NVE7 773 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 SIX4Q9UIU6 781 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 SNX9Q9Y5X1 595 aa12.22□□□□□ -0.45
SIL1-208ENST00000505945 FRMD3A2A2Y4 597 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 LRP3O75074 770 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 DDX6P26196 483 aaKnown RBP eCLIP12.21□□□□□ -0.45
SIL1-208ENST00000505945 RPL10AP62906 217 aaKnown RBP12.21□□□□□ -0.45
SIL1-208ENST00000505945 RBP5P82980 135 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms