RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 GPR158Q5T848 1215 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 SLC39A4Q6P5W5 647 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 CD302Q8IX05 232 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 OXCT2Q9BYC2 517 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 NEUROG3Q9Y4Z2 214 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 TCHHQ07283 1943 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 OR6C75A6NL08 312 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 ANKRD63C9JTQ0 380 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 TAF4O00268 1085 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 FAM189A1O60320 539 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 DDIT3P35638 169 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 GTF2BQ00403 316 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 DUSP4Q13115 394 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 ZBTB6Q15916 424 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 SPATA1Q5VX52 437 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 FSTL4Q6MZW2 842 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 ARMCX5Q6P1M9 558 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 SFR1Q86XK3 245 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 SENP8Q96LD8 212 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 HHIPQ96QV1 700 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 TSPAN18Q96SJ8 248 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 CCSER1Q9C0I3 900 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 DNAJC25Q9H1X3 360 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 CPSF3Q9UKF6 684 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 AGO2Q9UKV8 859 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 ASB3Q9Y575 518 aa17.3■□□□□ 0.36
PDLIM7-213ENST00000505074 ADAMTS20P59510 1910 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 TSC2P49815 1807 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 TISP43B9A030 160 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 RNF40O75150 1001 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 OAZ2O95190 189 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 GABRR2P28476 465 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 WEE1P30291 646 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 GBP1P32455 592 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 AARSP49588 968 aaKnown RBP eCLIP17.29■□□□□ 0.364e-9■■□□□ 11.9
PDLIM7-213ENST00000505074 AMPD2Q01433 879 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 CUL4AQ13619 759 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 USP49Q70CQ1 688 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 GAREM2Q75VX8 874 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 POMGNT1Q8WZA1 660 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 KCNN1Q92952 543 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 MRPL44Q9H9J2 332 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 STK17AQ9UEE5 414 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 SLC27A5Q9Y2P5 690 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 AKAP13Q12802 2813 aa17.29■□□□□ 0.36
PDLIM7-213ENST00000505074 TRDMT1O14717 391 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 DCLK1O15075 740 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 PRAMEF12O95522 483 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 TYMPP19971 482 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 CDR1P51861 262 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 LILRA4P59901 499 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 UAP1L1Q3KQV9 507 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 C9orf57Q5W0N0 161 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 KIAA1211LQ6NV74 962 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 SV2BQ7L1I2 683 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 DNAJB7Q7Z6W7 309 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 METTL23Q86XA0 190 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 NOC3LQ8WTT2 800 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 PSMG2Q969U7 264 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 CLIC6Q96NY7 704 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 FIZ1Q96SL8 496 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 TASP1Q9H6P5 420 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 GKN1Q9NS71 199 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 TBC1D7Q9P0N9 293 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 FBXO2Q9UK22 296 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 MSRB2Q9Y3D2 182 aa17.28■□□□□ 0.36
PDLIM7-213ENST00000505074 ABCA7Q8IZY2 2146 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 DENND4CQ5VZ89 1909 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 MYO16Q9Y6X6 1858 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 KIAA1549LQ6ZVL6 1849 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 MTMR11A4FU01 709 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 CDX4O14627 284 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 HYAL3O43820 417 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 SOAT2O75908 522 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 VNN2O95498 520 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 APBB3O95704 486 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 EGFP01133 1207 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 IDEP14735 1019 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 DRD1P21728 446 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 RESTQ13127 1097 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 GPR17Q13304 367 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 RUNX3Q13761 415 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 MYBPC2Q14324 1141 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 C11orf74Q86VG3 221 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 ATAD1Q8NBU5 361 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 DEFB124Q8NES8 71 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 EXOC4Q96A65 974 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 SEPT5Q99719 369 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 PYM1Q9BRP8 204 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 IKZF4Q9H2S9 585 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 CRISPLD1Q9H336 500 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 SLC32A1Q9H598 525 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 ASB7Q9H672 318 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 POLR3BQ9NW08 1133 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms