RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 CCDC114Q96M63 670 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 EPB41L4BQ9H329 900 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 GINS2Q9Y248 185 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 MANSC4A6NHS7 340 aaPredicted RBP16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 GOLGA8SH3BPF8 625 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 KRT1P04264 644 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 CYP2C9P11712 490 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 PSMA2P25787 234 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 IVDP26440 423 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 AXLP30530 894 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 PTPN7P35236 360 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 GABRB2P47870 512 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 YARSP54577 528 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 TMEM62Q0P6H9 643 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 KRT71Q3SY84 523 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 TLK2Q86UE8 772 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 CCDC89Q8N998 374 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 CPXM1Q96SM3 734 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 BCCIPQ9P287 314 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 NEU2Q9Y3R4 380 aa16.29■□□□□ 0.2
SNCAIP-207ENST00000504884 PI4K2BG5E9Z4 385 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 EIF3HO15372 352 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 DARSP14868 501 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 TCF4P15884 667 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 ADCY8P40145 1251 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 GPD2P43304 727 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 ATP1A2P50993 1020 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 NDST1P52848 882 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 ORC1Q13415 861 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 SLC29A2Q14542 456 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 MFSD10Q14728 455 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 STILQ15468 1287 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 HADHQ16836 314 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 TFDP3Q5H9I0 405 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 DRICH1Q6PGQ1 229 aaPredicted RBP16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 MFSD7Q6UXD7 560 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 SPOCD1Q6ZMY3 1216 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 ZNF365Q70YC5 407 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 TRMT10CQ7L0Y3 403 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 ANKS1BQ7Z6G8 1248 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 XYLT1Q86Y38 959 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 TRAIPQ9BWF2 469 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 NT5C1AQ9BXI3 368 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 MIS12Q9H081 205 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 SEMA4AQ9H3S1 761 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 CDHR5Q9HBB8 845 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 SNTG2Q9NY99 539 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 HMGXB4Q9UGU5 601 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 Q9Y3F1 56 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 SRCAPQ6ZRS2 3230 aa16.28■□□□□ 0.2
SNCAIP-207ENST00000504884 M0QYV0 167 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 ERBB2P04626 1255 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 KRT7P08729 469 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 ATF2P15336 505 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 CPT1AP50416 773 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 ACAP1Q15027 740 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 ZBTB6Q15916 424 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 KAZNQ674X7 775 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 RHBDF2Q6PJF5 856 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 LCLAT1Q6UWP7 414 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 EFR3BQ9Y2G0 817 aa16.27■□□□□ 0.2
SNCAIP-207ENST00000504884 HAS3O00219 553 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 IGF2BP3O00425 579 aaKnown RBP eCLIP16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 TP73O15350 636 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 KRT10P13645 584 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 PSEN2P49810 448 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 ADAM17P78536 824 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 PDCLQ13371 301 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 TAF1CQ15572 869 aaPredicted RBP16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 BEST2Q8NFU1 509 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 JOSD2Q8TAC2 188 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 CCHCR1Q8TD31 782 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 RAPGEF5Q92565 580 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 USP6NLQ92738 828 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 MCRS1Q96EZ8 462 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 SNX27Q96L92 541 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 OSMRQ99650 979 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 TMEM109Q9BVC6 243 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 AP5M1Q9H0R1 490 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 KLHL11Q9NVR0 708 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 TJP2Q9UDY2 1190 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 ANAPC5Q9UJX4 755 aa16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 NOVA2Q9UNW9 492 aaKnown RBP16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 DRG1Q9Y295 367 aaKnown RBP16.27■□□□□ 0.19
SNCAIP-207ENST00000504884 CITO14578 2027 aa16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 RIPK2O43353 540 aa16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 LIASO43766 372 aa16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 SHBGP04278 402 aa16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 MDH1P40925 334 aaKnown RBP16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 ZNF157P51786 506 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 BYSLQ13895 437 aaKnown RBP16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 TRIP13Q15645 432 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 C6orf118Q5T5N4 469 aa16.26■□□□□ 0.19
SNCAIP-207ENST00000504884 ALKAL1Q6UXT8 129 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms