RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SCARA3Q6AZY7 606 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 CDHR3Q6ZTQ4 885 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 DENND5BQ6ZUT9 1274 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 DPH6Q7L8W6 267 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 NLRX1Q86UT6 975 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 ZC3H3Q8IXZ2 948 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 ST13P4Q8IZP2 240 aaPredicted RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 SMC1BQ8NDV3 1235 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 PPP1R14CQ8TAE6 165 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 IFT43Q96FT9 208 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 SERAC1Q96JX3 654 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 SENP7Q9BQF6 1050 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 CENPKQ9BS16 269 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 KLHL4Q9C0H6 718 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 FBXO28Q9NVF7 368 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 PIH1D1Q9NWS0 290 aaKnown RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 PSMC3IPQ9P2W1 217 aaPredicted RBP8□□□□□ -1.13
NEDD9-208ENST00000504387 PCSK1NQ9UHG2 260 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 AGTPBP1Q9UPW5 1226 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 MROH7Q68CQ1 1323 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 MYH11P35749 1972 aa8□□□□□ -1.13
NEDD9-208ENST00000504387 TOGARAM1Q9Y4F4 1720 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 GTPBP10A4D1E9 387 aaKnown RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CAPN8A6NHC0 703 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 E7ENQ6 273 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ZNF862O60290 1169 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 TOM1L1O75674 476 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 VAV1P15498 845 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 GLRA2P23416 452 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 MFAP3P55082 362 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 OCRLQ01968 901 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 MED21Q13503 144 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 TTLL12Q14166 644 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 HIF1AQ16665 826 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ZNF568Q3ZCX4 644 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 SYDE2Q5VT97 1194 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 PADI6Q6TGC4 694 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 RBM44Q6ZP01 1051 aaKnown RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ULK2Q8IYT8 1036 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CNBD2Q96M20 576 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 PPP1R1BQ9UD71 204 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ATF5Q9Y2D1 282 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 IVNS1ABPQ9Y6Y0 642 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 SMCHD1A6NHR9 2005 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 LYPLA1O75608 230 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ZWINTO95229 277 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 GSTA2P09210 222 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 NCF2P19878 526 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 IGBP1P78318 339 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CYTH1Q15438 398 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CHI3L2Q15782 390 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ACAD10Q6JQN1 1059 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ACER1Q8TDN7 264 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 PTCD3Q96EY7 689 aaKnown RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 PDP2Q9P2J9 529 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 LGALS13Q9UHV8 139 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ANGPTL2Q9UKU9 493 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 A0A1B0GUL6 1792 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CYP3A7-CYP3A51PA0A087WV96 503 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ATP2A1O14983 1001 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 TYROBPO43914 113 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 UGT1A9O60656 530 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 RAD17O75943 681 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 TNNI1P19237 187 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 GEMIN4P57678 1058 aaKnown RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 AP2B1P63010 937 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ZNF200P98182 395 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CDK16Q00536 496 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 PDE1BQ01064 536 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 DBN1Q16643 649 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 C1orf220Q5T0J3 134 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CYP4A22Q5TCH4 519 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 C16orf46Q6P387 395 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 TMEM270Q6UE05 265 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 CENPUQ71F23 418 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 MARK2Q7KZI7 788 aaKnown RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 XXYLT1Q8NBI6 393 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ZFAND2BQ8WV99 257 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 MOCOSQ96EN8 888 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 NT5C1BQ96P26 610 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 TRAPPC9Q96Q05 1148 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 FAM213AQ9BRX8 229 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 PHACTR1Q9C0D0 580 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.99□□□□□ -1.132e-11■■□□□ 11.8
NEDD9-208ENST00000504387 UGT1A7Q9HAW7 530 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 UGT1A10Q9HAW8 530 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 UGT1A8Q9HAW9 530 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 KCNK13Q9HB14 408 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 VAV3Q9UKW4 847 aa7.99□□□□□ -1.13
NEDD9-208ENST00000504387 MAGED2Q9UNF1 606 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 MYH14Q7Z406 1995 aaKnown RBP7.99□□□□□ -1.13
NEDD9-208ENST00000504387 ROBO1Q9Y6N7 1651 aa7.98□□□□□ -1.13
NEDD9-208ENST00000504387 CENPFP49454 3210 aa7.98□□□□□ -1.13
NEDD9-208ENST00000504387 SPECC1L-ADORA2AF8WAN1 911 aa7.98□□□□□ -1.13
NEDD9-208ENST00000504387 DGKIO75912 1065 aa7.98□□□□□ -1.13
NEDD9-208ENST00000504387 BBOX1O75936 387 aa7.98□□□□□ -1.13
NEDD9-208ENST00000504387 TCN1P20061 433 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-208ENST00000504387 DSG3P32926 999 aa7.98□□□□□ -1.13
NEDD9-208ENST00000504387 HSPA1LP34931 641 aa7.98□□□□□ -1.13
NEDD9-208ENST00000504387 NFX1Q12986 1120 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms