RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MATR3P43243 847 aaKnown RBP eCLIP17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 IFNAR2P48551 515 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 SCAPQ12770 1279 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 NR1H3Q13133 447 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 ZNF268Q14587 947 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 MTF1Q14872 753 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 TXNDC8Q6A555 127 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 SLC23A3Q6PIS1 610 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 TMEM150AQ86TG1 271 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 TTC30AQ86WT1 665 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 MDGA1Q8NFP4 955 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 OR10T2Q8NGX3 314 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 SPPL2BQ8TCT7 592 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 C2orf15Q8WU43 125 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 ATP2A3Q93084 1043 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 SENP8Q96LD8 212 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 DRC1Q96MC2 740 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 ZCWPW1Q9H0M4 648 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 C17orf75Q9HAS0 396 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 KIAA1024Q9UPX6 916 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 CACNA1EQ15878 2313 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 TTC26A0AVF1 554 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 SLC16A4O15374 487 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 ZIC2O95409 532 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 CLTAP09496 248 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 OR52Z1P0C646 297 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 LILRA4P59901 499 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 PPP2R3AQ06190 1150 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 ECM1Q16610 540 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 C2orf27AQ580R0 203 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 LMBRD2Q68DH5 695 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 ARMCX6Q7L4S7 300 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 RAB44Q7Z6P3 723 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 MON1AQ86VX9 555 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 TMEFF1Q8IYR6 380 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 DAW1Q8N136 415 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 OLIG1Q8TAK6 271 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 OSCP1Q8WVF1 389 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 SPACA7Q96KW9 195 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 TMEM74BQ9NUR3 256 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 MMP17Q9ULZ9 603 aa17.13■□□□□ 0.33
PDLIM7-210ENST00000503827 HAPLN1P10915 354 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 P2RY2P41231 377 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 GUCY2FP51841 1108 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 CDR1P51861 262 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 SEC13P55735 322 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 MCL1Q07820 350 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 TRIM29Q14134 588 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 CRY1Q16526 586 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 ZPBP2Q6X784 338 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 THEM5Q8N1Q8 247 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 TTC16Q8NEE8 873 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 GTPBP2Q9BX10 602 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 DDX19AQ9NUU7 478 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 MBD1Q9UIS9 605 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 DSEQ9UL01 958 aa17.12■□□□□ 0.33
PDLIM7-210ENST00000503827 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 OPHN1O60890 802 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 CYP11A1P05108 521 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 CFIP05156 583 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 HMGA1P17096 107 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 PTGER3P43115 390 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 SPDYCQ5MJ68 293 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 LYSMD4Q5XG99 296 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 METTL23Q86XA0 190 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 CCDC33Q8N5R6 958 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 RLN3Q8WXF3 142 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 TSPAN18Q96SJ8 248 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 NTPCRQ9BSD7 190 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 KCNG1Q9UIX4 513 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 SLC6A14Q9UN76 642 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 MAGED2Q9UNF1 606 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 WNT6Q9Y6F9 365 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 HELZP42694 1942 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 IGSF10Q6WRI0 2623 aa17.11■□□□□ 0.33
PDLIM7-210ENST00000503827 ANAPC1Q9H1A4 1944 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 PLXNB3Q9ULL4 1909 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 SCN1AP35498 2009 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 K7EQS6 105 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 PPEF2O14830 753 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 CSH1P0DML2 217 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 CSH2P0DML3 217 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 HOXD12P35452 270 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 FOSBP53539 338 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 FAM193AP78312 1265 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 BYSLQ13895 437 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms