RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SLC9A1P19634 815 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 CDK11BP21127 795 aaKnown RBP17.6■□□□□ 0.41
SCLT1-205ENST00000503401 MDH1BQ5I0G3 518 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 PTCRAQ6ISU1 281 aaPredicted RBP17.6■□□□□ 0.41
SCLT1-205ENST00000503401 ELMSAN1Q6PJG2 1045 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 RRAGAQ7L523 313 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 ARHGEF19Q8IW93 802 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 TCEAL8Q8IYN2 117 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 PPM1KQ8N3J5 372 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 HDAC7Q8WUI4 952 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 KAT5Q92993 513 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 ZNF707Q96C28 371 aaPredicted RBP17.6■□□□□ 0.41
SCLT1-205ENST00000503401 NT5C1BQ96P26 610 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 CYP3A43Q9HB55 503 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 USP15Q9Y4E8 981 aaPredicted RBP17.6■□□□□ 0.41
SCLT1-205ENST00000503401 INSL5Q9Y5Q6 135 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 MYH10P35580 1976 aa17.6■□□□□ 0.41
SCLT1-205ENST00000503401 SMTNL1A8MU46 457 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 IL9P15248 144 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 PTPN1P18031 435 aaKnown RBP17.59■□□□□ 0.41
SCLT1-205ENST00000503401 SMAD4Q13485 552 aaKnown RBP17.59■□□□□ 0.41
SCLT1-205ENST00000503401 CUL2Q13617 745 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 ZNF394Q53GI3 561 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 FAM171BQ6P995 826 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 GBP6Q6ZN66 633 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 CCDC149Q6ZUS6 474 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 ACOT1Q86TX2 421 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCLT1-205ENST00000503401 B3GALNT2Q8NCR0 500 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 MYLPFQ96A32 169 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 SEPT5Q99719 369 aaPredicted RBP17.59■□□□□ 0.41
SCLT1-205ENST00000503401 ADAM7Q9H2U9 754 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 CISHQ9NSE2 258 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 ZDHHC7Q9NXF8 308 aa17.59■□□□□ 0.41
SCLT1-205ENST00000503401 MRPS5P82675 430 aaKnown RBP17.58■□□□□ 0.41
SCLT1-205ENST00000503401 CYP27A1Q02318 531 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 INCA1Q0VD86 236 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 TWF1Q12792 350 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 EXOC3L4Q17RC7 722 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 UVSSAQ2YD98 709 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 MGAT5BQ3V5L5 792 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 PHLDB3Q6NSJ2 640 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 CES5AQ6NT32 575 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 GJB7Q6PEY0 223 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 WHAMMQ8TF30 809 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 SMG7Q92540 1137 aaKnown RBP17.58■□□□□ 0.41
SCLT1-205ENST00000503401 PCED1BQ96HM7 432 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 PRKD2Q9BZL6 878 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 YIPF1Q9Y548 306 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 PCDHB5Q9Y5E4 795 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 MUC3AQ02505 3323 aa17.58■□□□□ 0.41
SCLT1-205ENST00000503401 NOTCH4Q99466 2003 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 CILPO75339 1184 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 LRG1P02750 347 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 CYP2F1P24903 491 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 PON1P27169 355 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 COPB1P53618 953 aaKnown RBP17.58■□□□□ 0.4
SCLT1-205ENST00000503401 ITIH3Q06033 890 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 NFE2Q16621 373 aaPredicted RBP17.58■□□□□ 0.4
SCLT1-205ENST00000503401 LRSAM1Q6UWE0 723 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 GPR149Q86SP6 731 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 SPATA2LQ8IUW3 424 aaPredicted RBP17.58■□□□□ 0.4
SCLT1-205ENST00000503401 C12orf29Q8N999 325 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 CMASQ8NFW8 434 aaPredicted RBP17.58■□□□□ 0.4
SCLT1-205ENST00000503401 MYCBPAPQ8TBZ2 947 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 ATXN2LQ8WWM7 1075 aaKnown RBP17.58■□□□□ 0.4
SCLT1-205ENST00000503401 ASB2Q96Q27 587 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 ELOVL4Q9GZR5 314 aa17.58■□□□□ 0.4
SCLT1-205ENST00000503401 LIMA1Q9UHB6 759 aaKnown RBP17.58■□□□□ 0.4
SCLT1-205ENST00000503401 GTPBP10A4D1E9 387 aaKnown RBP17.57■□□□□ 0.4
SCLT1-205ENST00000503401 CLDN5O00501 218 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 GPR15P49685 360 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 AAK1Q2M2I8 961 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 APTXQ7Z2E3 356 aaKnown RBP17.57■□□□□ 0.4
SCLT1-205ENST00000503401 UNC93AQ86WB7 457 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 STKLD1Q8NE28 680 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 ANKRD20A12PQ8NF67 263 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 SPPL2BQ8TCT7 592 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 C2orf15Q8WU43 125 aaKnown RBP17.57■□□□□ 0.4
SCLT1-205ENST00000503401 SUSD6Q92537 303 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 FAXDC2Q96IV6 333 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 PIDD1Q9HB75 910 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 HCFC1R1Q9NWW0 138 aa17.57■□□□□ 0.4
SCLT1-205ENST00000503401 TPM2P07951 284 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 HNRNPA1P09651 372 aaKnown RBP eCLIP17.56■□□□□ 0.4
SCLT1-205ENST00000503401 HAPLN1P10915 354 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-205ENST00000503401 CCDC130P13994 396 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 BDNFP23560 247 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 TBXAS1P24557 533 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-205ENST00000503401 HOXA9P31269 272 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 NTHL1P78549 312 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 KCNMA1Q12791 1236 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 SMARCB1Q12824 385 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-205ENST00000503401 ATAT1Q5SQI0 421 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 SDHAF4Q5VUM1 108 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 GRASPQ7Z6J2 395 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms