RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ADSSP30520 456 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 POLR2BP30876 1174 aaKnown RBP11.55□□□□□ -0.56
SNCA-207ENST00000502987 POU5F1Q01860 360 aaKnown RBP11.55□□□□□ -0.56
SNCA-207ENST00000502987 SMARCB1Q12824 385 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 BFSP1Q12934 665 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 RESTQ13127 1097 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 STK38Q15208 465 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 LPAL2Q16609 132 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 C1orf228Q6PIY5 440 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 PRR23BQ6ZRT6 265 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 DGLUCYQ7Z3D6 616 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 LRRTM3Q86VH5 581 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 CCDC65Q8IXS2 484 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 ZBTB44Q8NCP5 570 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 TTC16Q8NEE8 873 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 BPIFB1Q8TDL5 484 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 DNAJC19Q96DA6 116 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 MSANTD3Q96H12 275 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 PI4K2AQ9BTU6 479 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 RBAKQ9NYW8 714 aaPredicted RBP11.55□□□□□ -0.56
SNCA-207ENST00000502987 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 GMEB2Q9UKD1 530 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 USP18Q9UMW8 372 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
SNCA-207ENST00000502987 RALGAPA1Q6GYQ0 2036 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 NCANO14594 1321 aa11.55□□□□□ -0.56
SNCA-207ENST00000502987 SHISA7A6NL88 538 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 SPECC1L-ADORA2AF8WAN1 911 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 PRPF6O94906 941 aaKnown RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 TMEM191BP0C7N4 346 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 HAPLN1P10915 354 aaPredicted RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 CHRNB1P11230 501 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 ATF6P18850 670 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 GARTP22102 1010 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 AVPR1AP37288 418 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 MYL7Q01449 175 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 SATB1Q01826 763 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 FCHO2Q0JRZ9 810 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 ALCAMQ13740 583 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 PUM1Q14671 1186 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNCA-207ENST00000502987 SLC39A14Q15043 492 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 PON2Q15165 354 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 NFE2Q16621 373 aaPredicted RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 RSPO4Q2I0M5 234 aaPredicted RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 HEATR6Q6AI08 1181 aaKnown RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 STXBP4Q6ZWJ1 553 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 RALGPS2Q86X27 583 aaPredicted RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 BRSK2Q8IWQ3 736 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 GPR161Q8N6U8 529 aaKnown RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 CELF5Q8N6W0 485 aaKnown RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 MAB21L3Q8N8X9 362 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 ZSWIM2Q8NEG5 633 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 WNT2BQ93097 391 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 USP28Q96RU2 1077 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 IER2Q9BTL4 223 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 SLC46A2Q9BY10 475 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 ZSCAN16Q9H4T2 348 aaPredicted RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 TMEM206Q9H813 350 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 PRMT8Q9NR22 394 aaPredicted RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 GKN1Q9NS71 199 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 RBM12Q9NTZ6 932 aaKnown RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 DDX43Q9NXZ2 648 aaKnown RBP11.54□□□□□ -0.56
SNCA-207ENST00000502987 DENND4CQ5VZ89 1909 aa11.54□□□□□ -0.56
SNCA-207ENST00000502987 ATG2BQ96BY7 2078 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 COL4A2P08572 1712 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 ARNTLO00327 626 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 EXTL3O43909 919 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 LILRB5O75023 590 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 CSH1P0DML2 217 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 CSH2P0DML3 217 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 ACAT1P24752 427 aaKnown RBP11.53□□□□□ -0.56
SNCA-207ENST00000502987 CTHP32929 405 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 CASP5P51878 434 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 MLLT6P55198 1093 aaPredicted RBP11.53□□□□□ -0.56
SNCA-207ENST00000502987 RBP5P82980 135 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 TNK2Q07912 1038 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 DGKKQ5KSL6 1271 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 CC2D1AQ6P1N0 951 aaPredicted RBP11.53□□□□□ -0.56
SNCA-207ENST00000502987 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 PDCL2Q8N4E4 241 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 SPEM1Q8N4L4 309 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 MRPS31Q92665 395 aaKnown RBP11.53□□□□□ -0.56
SNCA-207ENST00000502987 ANKRD36BP1Q96IX9 119 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 LRRC3BQ96PB8 259 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 CBWD1Q9BRT8 395 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 MKNK1Q9BUB5 465 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 STRA6Q9BX79 667 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 LRRC27Q9C0I9 530 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 EPC1Q9H2F5 836 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 PDE11AQ9HCR9 933 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 OBP2AQ9NY56 170 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
SNCA-207ENST00000502987 ZMYM5Q9UJ78 669 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 SNX9Q9Y5X1 595 aa11.53□□□□□ -0.56
SNCA-207ENST00000502987 OTOGLQ3ZCN5 2332 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms