RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21■□□□□ 0.95
SCAMP3-209ENST00000497470 ZNHIT6Q9NWK9 470 aaKnown RBP21■□□□□ 0.95
SCAMP3-209ENST00000497470 PCDHGC3Q9UN70 934 aa21■□□□□ 0.95
SCAMP3-209ENST00000497470 NME7Q9Y5B8 376 aa21■□□□□ 0.95
SCAMP3-209ENST00000497470 PLXNA4Q9HCM2 1894 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 RNF225M0QZC1 329 aaPredicted RBP20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 ADH1AP07327 375 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 KRT5P13647 590 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 MAGEA11P43364 429 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 PPP1R2P3Q6NXS1 205 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 TC2NQ8N9U0 490 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 PPP2R3CQ969Q6 453 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 ELMO3Q96BJ8 720 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 TWNKQ96RR1 684 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 CDCA3Q99618 268 aaPredicted RBP20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 ABHD10Q9NUJ1 306 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 DPP7Q9UHL4 492 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 ATP8B3O60423 1300 aa20.99■□□□□ 0.95
SCAMP3-209ENST00000497470 SSU72P8A0A1W2PR75 194 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 C2orf71A6NGG8 1288 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 CYP26A1O43174 497 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 CYP11B1P15538 503 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 DNAJB1P25685 340 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 PDE6CP51160 858 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 ERVFC1P60507 584 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 LCLAT1Q6UWP7 414 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 VSTM1Q6UX27 236 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 TRIM72Q6ZMU5 477 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 EPS8L1Q8TE68 723 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 ZNF606Q8WXB4 792 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 ARNTL2Q8WYA1 636 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 HEXIM2Q96MH2 286 aaKnown RBP20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 UBXN6Q9BZV1 441 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 LHX5Q9H2C1 402 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 CRTAC1Q9NQ79 661 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 ENTPD7Q9NQZ7 604 aa20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 AFF4Q9UHB7 1163 aaKnown RBP20.98■□□□□ 0.95
SCAMP3-209ENST00000497470 SERPING1P05155 500 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 PDGFRBP09619 1106 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 ATF2P15336 505 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 GNA15P30679 374 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 MAPK8IP2Q13387 824 aaPredicted RBP20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 ASIC2Q16515 512 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 PTPN21Q16825 1174 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 LILRA6Q6PI73 481 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 PRSS55Q6UWB4 352 aaPredicted RBP20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 ACOT1Q86TX2 421 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 CPLX3Q8WVH0 158 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 DDX1Q92499 740 aaKnown RBP20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 CYFIP2Q96F07 1278 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 KLHL5Q96PQ7 755 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 PPP1R9BQ96SB3 815 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 SYT11Q9BT88 431 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 ZNF518BQ9C0D4 1074 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 PNPLA8Q9NP80 782 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 HMGXB4Q9UGU5 601 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 NOCTQ9UK39 431 aaKnown RBP20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 CDY1Q9Y6F8 540 aa20.97■□□□□ 0.95
SCAMP3-209ENST00000497470 O00370 1275 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 TEX28O15482 410 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 PAPLNO95428 1278 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 LSM8O95777 96 aaKnown RBP20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 CNPP09543 421 aaKnown RBP20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 SETSIPP0DME0 302 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 CDH5P33151 784 aaPredicted RBP20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 USP8P40818 1118 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 CDR2Q01850 454 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 ROR1Q01973 937 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 CCDC173Q0VFZ6 552 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 HGSNATQ68CP4 663 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 SPRED2Q7Z698 418 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 LRRTM3Q86VH5 581 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 ANKRD52Q8NB46 1076 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 STK32AQ8WU08 396 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 CSNK1G1Q9HCP0 422 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 CYLDQ9NQC7 956 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 MTUS1Q9ULD2 1270 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 PCDHB5Q9Y5E4 795 aa20.96■□□□□ 0.95
SCAMP3-209ENST00000497470 MYBPHLA2RUH7 354 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 OR1D2P34982 312 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 TUFMP49411 452 aaKnown RBP20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 KLHL30Q0D2K2 578 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 PKDCCQ504Y2 493 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 ZNF394Q53GI3 561 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 ELMSAN1Q6PJG2 1045 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 RSPO2Q6UXX9 243 aaPredicted RBP20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 SLC47A2Q86VL8 602 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 VPS36Q86VN1 386 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 TCEAL8Q8IYN2 117 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 FUKQ8N0W3 1084 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 PCED1BQ96HM7 432 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 B3GALT6Q96L58 329 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 PLEKHA4Q9H4M7 779 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 HESX1Q9UBX0 185 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 GTF3C4Q9UKN8 822 aa20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 RANBP2P49792 3224 aaKnown RBP20.95■□□□□ 0.94
SCAMP3-209ENST00000497470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 NCK2O43639 380 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 CPB1P15086 417 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms