RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 HIPK4Q8NE63 616 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 CTCFLQ8NI51 663 aaPredicted RBP6.12□□□□□ -1.43
GGPS1-208ENST00000497327 WASF1Q92558 559 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 ARMC5Q96C12 935 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 C8orf76Q96K31 380 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 LZTS2Q9BRK4 669 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 GREB1LQ9C091 1923 aaPredicted RBP6.12□□□□□ -1.43
GGPS1-208ENST00000497327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.12□□□□□ -1.43
GGPS1-208ENST00000497327 VEZTQ9HBM0 779 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 CLIP2Q9UDT6 1046 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 SYNPO2Q9UMS6 1093 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 STX8Q9UNK0 236 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 CTDP1Q9Y5B0 961 aaPredicted RBP6.12□□□□□ -1.43
GGPS1-208ENST00000497327 ECM29Q5VYK3 1845 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 A0A1W2PRG0 241 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 TCRBV16S1A1N1A0A5B0 115 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 SLC12A8A0AV02 714 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 KIF28PB7ZC32 967 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 H3BQV1 296 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 GH2P01242 217 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 EEF2P13639 858 aaKnown RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 U2AF2P26368 475 aaKnown RBP eCLIP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 GUCY1B3Q02153 619 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 KIF23Q02241 960 aaPredicted RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 RBL2Q08999 1139 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ZNF543Q08ER8 600 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 PFKFB3Q16875 520 aaPredicted RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 FAM173BQ6P4H8 233 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 MIGA2Q7L4E1 593 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 BRAPQ7Z569 592 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 APOBEC3FQ8IUX4 373 aaKnown RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 GMCL1P1Q8NEA9 526 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 SHCBP1Q8NEM2 672 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 MTMR8Q96EF0 704 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 MAGEB10Q96LZ2 347 aaPredicted RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ANP32EQ9BTT0 268 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 SPZ1Q9BXG8 430 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 DEFB129Q9H1M3 183 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ZSCAN16Q9H4T2 348 aaPredicted RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ZNF703Q9H7S9 590 aaPredicted RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ADARB2Q9NS39 739 aaKnown RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 CEP72Q9P209 647 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 SFMBT1Q9UHJ3 866 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ZNF112Q9UJU3 913 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ZBTB21Q9ULJ3 1066 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 SCAF8Q9UPN6 1271 aaKnown RBP6.11□□□□□ -1.43
GGPS1-208ENST00000497327 ATP6V1DQ9Y5K8 247 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 PPP2R3BQ9Y5P8 575 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 SBF1O95248 1867 aa6.11□□□□□ -1.43
GGPS1-208ENST00000497327 DICER1Q9UPY3 1922 aaKnown RBP6.1□□□□□ -1.43
GGPS1-208ENST00000497327 hCG_1642624A0A1W2PR95 340 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 GLTPD2A6NH11 291 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 KLRF2D3W0D1 207 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 MPHOSPH10O00566 681 aaKnown RBP6.1□□□□□ -1.43
GGPS1-208ENST00000497327 MMP1P03956 469 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 PARP1P09874 1014 aaKnown RBP6.1□□□□□ -1.43
GGPS1-208ENST00000497327 GOLGA8HP0CJ92 632 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 SCG2P13521 617 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 APEX1P27695 318 aaKnown RBP6.1□□□□□ -1.43
GGPS1-208ENST00000497327 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.43
GGPS1-208ENST00000497327 ALDH6A1Q02252 535 aaKnown RBP6.1□□□□□ -1.43
GGPS1-208ENST00000497327 ICA1Q05084 483 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 TMEM132BQ14DG7 1078 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 GPR162Q16538 588 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 ASPRV1Q53RT3 343 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 TMEM177Q53S58 311 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 KIAA1755Q5JYT7 1200 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 ATL3Q6DD88 541 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 OTOP1Q7RTM1 612 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 ADGRE4PQ86SQ3 457 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 FAM177A1Q8N128 213 aaPredicted RBP6.1□□□□□ -1.43
GGPS1-208ENST00000497327 WDR48Q8TAF3 677 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 ACER1Q8TDN7 264 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 CHFRQ96EP1 664 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 PLEKHG4BQ96PX9 1271 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 DNAJC7Q99615 494 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 TRIM8Q9BZR9 551 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 TRIM39Q9HCM9 518 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 CABP5Q9NP86 173 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 SH3GLB2Q9NR46 395 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 GGA3Q9NZ52 723 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 RCOR1Q9UKL0 485 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 CNPY2Q9Y2B0 182 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 TMX2Q9Y320 296 aa6.1□□□□□ -1.43
GGPS1-208ENST00000497327 ELP1O95163 1332 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 BTBD18B2RXH4 712 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 F5H6K3 240 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 CTNND1O60716 968 aaKnown RBP6.09□□□□□ -1.43
GGPS1-208ENST00000497327 NDUFB10O96000 172 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 PTMSP20962 102 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 MCM7P33993 719 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 KLRC3Q07444 240 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 DPTQ07507 201 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 ADAM15Q13444 863 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 RIN1Q13671 783 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 GPATCH4Q5T3I0 446 aaKnown RBP6.09□□□□□ -1.43
GGPS1-208ENST00000497327 BTNL9Q6UXG8 535 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 USP50Q70EL3 339 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms