RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.37
APTX-233ENST00000496030 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
APTX-233ENST00000496030 CDH22Q9UJ99 828 aa12.74□□□□□ -0.37
APTX-233ENST00000496030 DSEQ9UL01 958 aa12.74□□□□□ -0.37
APTX-233ENST00000496030 R3HCC1Q9Y3T6 440 aaKnown RBP12.74□□□□□ -0.37
APTX-233ENST00000496030 HCFC2Q9Y5Z7 792 aa12.74□□□□□ -0.37
APTX-233ENST00000496030 SPTBN2O15020 2390 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 WDR27A2RRH5 827 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 OR6C75A6NL08 312 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 TGM5O43548 720 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 ADH1AP07327 375 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 OR4Q2P0C623 313 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 SPATA31D3P0C874 917 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 ATP1A3P13637 1013 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 LMO2P25791 158 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 CA8P35219 290 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 MTIF2P46199 727 aaKnown RBP12.73□□□□□ -0.37
APTX-233ENST00000496030 NOP14P78316 857 aaKnown RBP12.73□□□□□ -0.37
APTX-233ENST00000496030 MYL7Q01449 175 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 ROR1Q01973 937 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 CREMQ03060 361 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 KRT31Q15323 416 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 MAN2A1Q16706 1144 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 VWA3BQ502W6 1294 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 ZNF280DQ6N043 979 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 SPATA31D4Q6ZUB0 917 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 CREBRFQ8IUR6 639 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 ADGRF2Q8IZF7 708 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 ZNF461Q8TAF7 563 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 FEZF2Q8TBJ5 459 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 ZCWPW1Q9H0M4 648 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 S1PR5Q9H228 398 aa12.73□□□□□ -0.37
APTX-233ENST00000496030 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
APTX-233ENST00000496030 ARHGEF37A1IGU5 675 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
APTX-233ENST00000496030 ATP2C2O75185 946 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 PAPLNO95428 1278 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 WEE2P0C1S8 567 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 RAP1GAPP47736 663 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 LHX1P48742 406 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 ZNF445P59923 1031 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 TNNC1P63316 161 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 GPR17Q13304 367 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 LLGL2Q6P1M3 1020 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 SYCE2Q6PIF2 218 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 LRSAM1Q6UWE0 723 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 DGLUCYQ7Z3D6 616 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 LUZP1Q86V48 1076 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 PPFIBP1Q86W92 1011 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 METTL23Q86XA0 190 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 CNTNAP3BQ96NU0 1288 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 ARID3AQ99856 593 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 ACBD6Q9BR61 282 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 OXCT2Q9BYC2 517 aaPredicted RBP12.72□□□□□ -0.37
APTX-233ENST00000496030 CNTNAP3Q9BZ76 1288 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 NIF3L1Q9GZT8 377 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 TMLHEQ9NVH6 421 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
APTX-233ENST00000496030 TAB2Q9NYJ8 693 aa12.72□□□□□ -0.37
APTX-233ENST00000496030 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
APTX-233ENST00000496030 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 GTPBP10A4D1E9 387 aaKnown RBP12.71□□□□□ -0.37
APTX-233ENST00000496030 SEC24AO95486 1093 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 CAVIN2O95810 425 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 GLUD1P00367 558 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 PDGFRBP09619 1106 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 SLC9A1P19634 815 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
APTX-233ENST00000496030 GNL1P36915 607 aaPredicted RBP12.71□□□□□ -0.37
APTX-233ENST00000496030 ARPP19P56211 112 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 KCNMA1Q12791 1236 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 TPGS2Q68CL5 300 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
APTX-233ENST00000496030 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 FAM171BQ6P995 826 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 RNF19BQ6ZMZ0 732 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 UBR7Q8N806 425 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 WHAMMQ8TF30 809 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 LPIN3Q9BQK8 851 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 INTS2Q9H0H0 1204 aaKnown RBP12.71□□□□□ -0.37
APTX-233ENST00000496030 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 CYP3A43Q9HB55 503 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 SIX2Q9NPC8 291 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 CRTAC1Q9NQ79 661 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 FBXW11Q9UKB1 542 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 SORCS3Q9UPU3 1222 aa12.71□□□□□ -0.37
APTX-233ENST00000496030 CHD6Q8TD26 2715 aa12.71□□□□□ -0.38
APTX-233ENST00000496030 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.38
APTX-233ENST00000496030 MAP1BP46821 2468 aaKnown RBP12.7□□□□□ -0.38
APTX-233ENST00000496030 MYBPHLA2RUH7 354 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms