RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 HIF1AQ16665 826 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 SLFN12LQ6IEE8 588 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 ARFGAP1Q8N6T3 406 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 JOSD2Q8TAC2 188 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 KCNV2Q8TDN2 545 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 LRRC8CQ8TDW0 803 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 ZNF668Q96K58 619 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 TTC25Q96NG3 672 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 FOXP3Q9BZS1 431 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 MAFBQ9Y5Q3 323 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 RLFQ13129 1914 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 PIGRP01833 764 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 T-ENOLP0DO92 83 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 CCND1P24385 295 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 ADRA1DP25100 572 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 OTUD4Q01804 1114 aaKnown RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 PLEKHG4Q58EX7 1191 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 PPP1R15BQ5SWA1 713 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 CENPUQ71F23 418 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 EMC1Q8N766 993 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 CCHCR1Q8TD31 782 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 ALG13Q9NP73 1137 aaKnown RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 NKX1-2Q9UD57 310 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-217ENST00000495688 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
PTPN7-217ENST00000495688 C3orf70A6NLC5 250 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 LDHAP00338 332 aaKnown RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 LACTBP83111 547 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 MCL1Q07820 350 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 CCDC15Q0P6D6 951 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 OVGP1Q12889 678 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 MAPK6Q16659 721 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 GNPTABQ3T906 1256 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 HHATQ5VTY9 493 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 OTOAQ7RTW8 1153 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 SLC35B2Q8TB61 432 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 CPT1BQ92523 772 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 NKD2Q969F2 451 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 MIEF2Q96C03 454 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 UBN1Q9NPG3 1134 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 CYTH4Q9UIA0 394 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 RABGEF1Q9UJ41 708 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 DRG1Q9Y295 367 aaKnown RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 FAM189A1O60320 539 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 CST8O60676 142 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 CALB1P05937 261 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 ITGAVP06756 1048 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 GM2AP17900 193 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 OSTNP61366 133 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 NR1H3Q13133 447 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 TAF5Q15542 800 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 CIAPIN1Q6FI81 312 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 RHPN2Q8IUC4 686 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 C10orf82Q8WW14 230 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 ZNF75CPQ92670 426 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 PCDH9Q9HC56 1237 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 NPHS2Q9NP85 383 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 PSMC3IPQ9P2W1 217 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 SHOC2Q9UQ13 582 aa13.69□□□□□ -0.22
PTPN7-217ENST00000495688 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-217ENST00000495688 KAT6AQ92794 2004 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 LRCH4O75427 683 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 SKIV2L2P42285 1042 aaKnown RBP13.68□□□□□ -0.22
PTPN7-217ENST00000495688 RAP1GAPP47736 663 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 ATP11AP98196 1134 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 PTPN20Q4JDL3 420 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 LRRC38Q5VT99 294 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 DENND1BQ6P3S1 775 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 C3orf62Q6ZUJ4 267 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 ZNF280CQ8ND82 737 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 PYROXD1Q8WU10 500 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 SLC7A6OSQ96CW6 309 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-217ENST00000495688 CDHR1Q96JP9 859 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 PCYT2Q99447 389 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 DCTN4Q9UJW0 460 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 SUFUQ9UMX1 484 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
PTPN7-217ENST00000495688 EIF4E1BA6NMX2 242 aaKnown RBP13.68□□□□□ -0.22
PTPN7-217ENST00000495688 TMEM63AO94886 807 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 PSMA2P25787 234 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 EPHB2P29323 1055 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 GEMIN4P57678 1058 aaKnown RBP13.68□□□□□ -0.22
PTPN7-217ENST00000495688 TFAMQ00059 246 aaKnown RBP13.68□□□□□ -0.22
PTPN7-217ENST00000495688 BRSK2Q8IWQ3 736 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 UNC45BQ8IWX7 931 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 PRPF31Q8WWY3 499 aaKnown RBP13.68□□□□□ -0.22
PTPN7-217ENST00000495688 WRNIP1Q96S55 665 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 TXLNGQ9NUQ3 528 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 SLC17A7Q9P2U7 560 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 PCSK1NQ9UHG2 260 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 HACL1Q9UJ83 578 aa13.68□□□□□ -0.22
PTPN7-217ENST00000495688 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 SKAP2O75563 359 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms