RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 LIN9Q5TKA1 542 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 PPP1R2P3Q6NXS1 205 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 LCLAT1Q6UWP7 414 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 SLC35F6Q8N357 371 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 C1orf131Q8NDD1 294 aaKnown RBP18.6■□□□□ 0.57
PSMB4-206ENST00000495288 ZNF653Q96CK0 615 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 ARHGEF26Q96DR7 871 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 ABHD8Q96I13 439 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 LHX5Q9H2C1 402 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 ADAM22Q9P0K1 906 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 HESX1Q9UBX0 185 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 SALL4Q9UJQ4 1053 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.6■□□□□ 0.57
PSMB4-206ENST00000495288 TTC3P53804 2025 aa18.6■□□□□ 0.57
PSMB4-206ENST00000495288 CYP11A1P05108 521 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 CCDC130P13994 396 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 CASQ1P31415 396 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 PBX3P40426 434 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 EPHB4P54760 987 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 CENPCQ03188 943 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 BTG3Q14201 252 aaPredicted RBP18.59■□□□□ 0.57
PSMB4-206ENST00000495288 IFI16Q16666 785 aaKnown RBP18.59■□□□□ 0.57
PSMB4-206ENST00000495288 OVOS1Q6IE37 1185 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 MMS22LQ6ZRQ5 1243 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 ERICH1Q86X53 443 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 MCOLN2Q8IZK6 566 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 WDTC1Q8N5D0 677 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 RNF10Q8N5U6 811 aaKnown RBP18.59■□□□□ 0.57
PSMB4-206ENST00000495288 LBHD1Q9BQE6 289 aaPredicted RBP18.59■□□□□ 0.57
PSMB4-206ENST00000495288 SYT15Q9BQS2 421 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 C11orf70Q9BRQ4 267 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 MED10Q9BTT4 135 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 ZNF518BQ9C0D4 1074 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 CTTNBP2NLQ9P2B4 639 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 CNOT8Q9UFF9 292 aaKnown RBP18.59■□□□□ 0.57
PSMB4-206ENST00000495288 ADAM28Q9UKQ2 775 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 TSPAN16Q9UKR8 245 aa18.59■□□□□ 0.57
PSMB4-206ENST00000495288 ATP8B3O60423 1300 aa18.58■□□□□ 0.57
PSMB4-206ENST00000495288 BTNL10A8MVZ5 291 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 TYMPP19971 482 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 PCSK1P29120 753 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 ALDH7A1P49419 539 aaKnown RBP18.58■□□□□ 0.56
PSMB4-206ENST00000495288 CDR1P51861 262 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 C2CD6Q53TS8 623 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 MDH1BQ5I0G3 518 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 TMEM240Q5SV17 173 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 COL13A1Q5TAT6 717 aaPredicted RBP18.58■□□□□ 0.56
PSMB4-206ENST00000495288 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 ARHGAP17Q68EM7 881 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 CEP57Q86XR8 500 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 PHF13Q86YI8 300 aaPredicted RBP18.58■□□□□ 0.56
PSMB4-206ENST00000495288 B3GALNT2Q8NCR0 500 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 SLC35G2Q8TBE7 412 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 TRIM11Q96F44 468 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 WDR24Q96S15 920 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 YME1L1Q96TA2 773 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 ZBED2Q9BTP6 218 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 CHORDC1Q9UHD1 332 aaPredicted RBP18.58■□□□□ 0.56
PSMB4-206ENST00000495288 CDH9Q9ULB4 789 aa18.58■□□□□ 0.56
PSMB4-206ENST00000495288 MICAL3Q7RTP6 2002 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 NCANO14594 1321 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 ATMINO43313 823 aaPredicted RBP18.57■□□□□ 0.56
PSMB4-206ENST00000495288 MYBL1P10243 752 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 TKTP29401 623 aaKnown RBP18.57■□□□□ 0.56
PSMB4-206ENST00000495288 CDH5P33151 784 aaPredicted RBP18.57■□□□□ 0.56
PSMB4-206ENST00000495288 KIAA0319Q5VV43 1072 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 PSRC1Q6PGN9 363 aaPredicted RBP18.57■□□□□ 0.56
PSMB4-206ENST00000495288 KIF18AQ8NI77 898 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 SPATA18Q8TC71 538 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 SLC2A14Q8TDB8 520 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 ALS2CR12Q96Q35 445 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.563e-15■■■■■ 27.7
PSMB4-206ENST00000495288 CWH43Q9H720 699 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 SYNCQ9H7C4 482 aa18.57■□□□□ 0.56
PSMB4-206ENST00000495288 A0A0A6YYK5 440 aaPredicted RBP18.56■□□□□ 0.56
PSMB4-206ENST00000495288 MYBPHLA2RUH7 354 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 CLDN5O00501 218 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 CYP1A2P05177 515 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 CALB1P05937 261 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 RRM1P23921 792 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 YWHAHQ04917 246 aaPredicted RBP18.56■□□□□ 0.56
PSMB4-206ENST00000495288 C1QBPQ07021 282 aaKnown RBP18.56■□□□□ 0.56
PSMB4-206ENST00000495288 CCDC142Q17RM4 750 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 MON1BQ7L1V2 547 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 CMTR2Q8IYT2 770 aaKnown RBP18.56■□□□□ 0.56
PSMB4-206ENST00000495288 MSANTD4Q8NCY6 345 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 RFFLQ8WZ73 363 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 ZNF689Q96CS4 500 aaPredicted RBP18.56■□□□□ 0.56
PSMB4-206ENST00000495288 VCPIP1Q96JH7 1222 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 RTP3Q9BQQ7 232 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 ACBD6Q9BR61 282 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 B3GNT5Q9BYG0 378 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 GPR62Q9BZJ7 368 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 CRTAC1Q9NQ79 661 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 ST7Q9NRC1 585 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 MARCH5Q9NX47 278 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 CYTH4Q9UIA0 394 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 GTF3C4Q9UKN8 822 aa18.56■□□□□ 0.56
PSMB4-206ENST00000495288 SF3B1O75533 1304 aaKnown RBP eCLIP18.55■□□□□ 0.564e-9■■■■■ 34.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms