RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 M0QYV0 167 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 SPTLC1O15269 473 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 ASAP2O43150 1006 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 ZEB2O60315 1214 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 MAP3K6O95382 1288 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 PFKMP08237 780 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 TFE3P19532 575 aaPredicted RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 IRAK1P51617 712 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 SEC24CP53992 1094 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 SOX4Q06945 474 aaPredicted RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 PPP1R7Q15435 360 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 FAM187BQ17R55 369 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 C15orf59Q2T9L4 293 aaPredicted RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 SYCP2LQ5T4T6 812 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 ACOT1Q86TX2 421 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 RASAL3Q86YV0 1011 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 TRPV1Q8NER1 839 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 MDM1Q8TC05 714 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 ACAP3Q96P50 834 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 JPH2Q9BR39 696 aaPredicted RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 NFKBIZQ9BYH8 718 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 LRRC19Q9H756 370 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 TMBIM4Q9HC24 238 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 SNX9Q9Y5X1 595 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 CITO14578 2027 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 MYL3P08590 195 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 MCF2P10911 925 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 CYP2C9P11712 490 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 PSMC1P62191 440 aaKnown RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 GNGT1P63211 74 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 PTPN11Q06124 597 aaPredicted RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 CCDC38Q502W7 563 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 CATSPER4Q7RTX7 472 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 TMEM35BQ8NCS4 154 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 EPS8L3Q8TE67 593 aaKnown RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 CLEC4CQ8WTT0 213 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 NAP1L3Q99457 506 aaPredicted RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 ADAM33Q9BZ11 813 aa10.99□□□□□ -0.65
SAMM50-206ENST00000494795 NOVA2Q9UNW9 492 aaKnown RBP10.99□□□□□ -0.65
SAMM50-206ENST00000494795 A6NJR5 290 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 MAGEB2O15479 319 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 PPFIA2O75334 1257 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 LRCH4O75427 683 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 BANF1O75531 89 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 PDGFRBP09619 1106 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 MYBL1P10243 752 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 LMO2P25791 158 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 ACTN2P35609 894 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 IFI35P80217 286 aaPredicted RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 NFX1Q12986 1120 aaKnown RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 DHX34Q14147 1143 aaKnown RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 PPP1R26Q5T8A7 1209 aaPredicted RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 XYLT1Q86Y38 959 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 RHOT1Q8IXI2 618 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 CCDC33Q8N5R6 958 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 NDRG1Q92597 394 aaKnown RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 TMEM176AQ96HP8 235 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 SLITRK1Q96PX8 696 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 FAM114A2Q9NRY5 505 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 CTNNAL1Q9UBT7 734 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 ASIC3Q9UHC3 531 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 ACSL3O95573 720 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 ECEL1O95672 775 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 KRT1P04264 644 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 HOXD8P13378 290 aaPredicted RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 GPD2P43304 727 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 ATXN1P54253 815 aaKnown RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 PMS2P54278 862 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 MAP2K5Q13163 448 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 MMRN1Q13201 1228 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 CDO1Q16878 200 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 ZNF467Q7Z7K2 595 aaPredicted RBP10.98□□□□□ -0.65
SAMM50-206ENST00000494795 ATP6V1G3Q96LB4 118 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 PEBP4Q96S96 227 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 RAB17Q9H0T7 212 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 SLC45A1Q9Y2W3 748 aa10.98□□□□□ -0.65
SAMM50-206ENST00000494795 LRRD1A4D1F6 860 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 E5RJQ4 531 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 RECQL4O94761 1208 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 PGK1P00558 417 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 F2P00734 622 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 CREB1P16220 341 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 ITGA8P53708 1063 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 GDF10P55107 478 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 MFSD10Q14728 455 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 NETO2Q8NC67 525 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 ZFP42Q96MM3 310 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 TMEM121Q9BTD3 319 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 NEU2Q9Y3R4 380 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 PPME1Q9Y570 386 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 FAM187AA6NFU0 413 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 C3orf70A6NLC5 250 aaPredicted RBP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 GOLGA8KD6RF30 607 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 OPA1O60313 960 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 FGFR1P11362 822 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 KRT3P12035 628 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 PSMA2P25787 234 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 AP3M2P53677 418 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 IQSEC1Q6DN90 963 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms