RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 TSR2Q969E8 191 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 REPS1Q96D71 796 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 PBKQ96KB5 322 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 CTAGE1Q96RT6 745 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 ARPC5LQ9BPX5 153 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 QRSL1Q9H0R6 528 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 RSPH9Q9H1X1 276 aaPredicted RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 KLC4Q9NSK0 619 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 ZNF69Q9UC07 566 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 RUVBL1Q9Y265 456 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 BICDL2A1A5D9 508 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 NEMP1O14524 444 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 TBX3O15119 743 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 NPHP1O15259 732 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 TSPAN6O43657 245 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 TTLL1O95922 423 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 TUBB4AP04350 444 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 AMY1AP04745 511 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 LDHCP07864 332 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 FAM163BP0C2L3 166 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 MTHFD1P11586 935 aaKnown RBP2.69□□□□□ -1.98
PTPN12-212ENST00000494248 PPP3CBP16298 524 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 DDCP20711 480 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 ARHGAP25P42331 645 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 CASP2P42575 452 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 KCTD2Q14681 263 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 SEPT2Q15019 361 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 DAZAP2Q15038 168 aaPredicted RBP2.69□□□□□ -1.98
PTPN12-212ENST00000494248 TMEM95Q3KNT9 176 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 Q4G0T1 1027 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 PREPLQ4J6C6 727 aaPredicted RBP2.69□□□□□ -1.98
PTPN12-212ENST00000494248 PLAC9Q5JTB6 97 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 DGKKQ5KSL6 1271 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 PPP4R4Q6NUP7 873 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 KRT26Q7Z3Y9 468 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 AOPEPQ8N6M6 819 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 IPO4Q8TEX9 1081 aaKnown RBP2.69□□□□□ -1.98
PTPN12-212ENST00000494248 FBXO41Q8TF61 875 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 TGFBRAP1Q8WUH2 860 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 NSMCE1Q8WV22 266 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 SNRNP27Q8WVK2 155 aaKnown RBP2.69□□□□□ -1.98
PTPN12-212ENST00000494248 VCPIP1Q96JH7 1222 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 C7orf25Q9BPX7 421 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 TLR10Q9BXR5 811 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 DMRT3Q9NQL9 472 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 NAP1L2Q9ULW6 460 aaPredicted RBP2.69□□□□□ -1.98
PTPN12-212ENST00000494248 DNM3Q9UQ16 869 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 LZTS1Q9Y250 596 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 NR2E3Q9Y5X4 410 aa2.69□□□□□ -1.98
PTPN12-212ENST00000494248 ADGRA2Q96PE1 1338 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 MYBBP1AQ9BQG0 1328 aaKnown RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 TTC36A6NLP5 189 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 PRSS44E7EML9 344 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 E7ENX8 843 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 MYO1FO00160 1098 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 TCERG1O14776 1098 aaKnown RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 PDE8AO60658 829 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 SUN1O94901 812 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 PCSK6P29122 969 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 TRAPPC10P48553 1259 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 PLCD1P51178 756 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 TAP2Q03519 686 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 CCDC96Q2M329 555 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 CD300EQ496F6 205 aaPredicted RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 INO80DQ53TQ3 878 aaPredicted RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 BRDTQ58F21 947 aaPredicted RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 TOR2AQ5JU69 321 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 UTP14CQ5TAP6 766 aaKnown RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 GET4Q7L5D6 327 aaPredicted RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 RAVER1Q8IY67 606 aaKnown RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 CHPFQ8IZ52 775 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 CAMKK1Q8N5S9 505 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 TEX19Q8NA77 164 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 B3GALNT2Q8NCR0 500 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 LMBR1Q8WVP7 490 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 SNX19Q92543 992 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 RFKQ969G6 155 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 ZC3H10Q96K80 434 aaKnown RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 TSPAN18Q96SJ8 248 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 ALG8Q9BVK2 526 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 C11orf54Q9H0W9 315 aaPredicted RBP2.68□□□□□ -1.98
PTPN12-212ENST00000494248 CHST12Q9NRB3 414 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 DNAJC28Q9NX36 388 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 ATP8A1Q9Y2Q0 1164 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 PCDHB1Q9Y5F3 818 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 PCDHGA2Q9Y5H1 932 aa2.68□□□□□ -1.98
PTPN12-212ENST00000494248 CYP2D7A0A087X1C5 515 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 CCDC195A0A1B0GUA6 201 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 ALG1L2C9J202 215 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 SOCS2O14508 198 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 ADAMTS3O15072 1205 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 TRIAP1O43715 76 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 BRINP1O60477 761 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 ALDH1L1O75891 902 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 AGFG2O95081 481 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 CPEP16870 476 aa2.67□□□□□ -1.98
PTPN12-212ENST00000494248 SLC6A4P31645 630 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms