RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 DALRD3Q5D0E6 543 aaKnown RBP2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 RESP18Q5W5W9 173 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 KLHDC10Q6PID8 442 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 C17orf53Q8N3J3 647 aaPredicted RBP2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 NSUN7Q8NE18 718 aaKnown RBP2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 TTC12Q9H892 705 aaPredicted RBP2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 EURLQ9NYK6 297 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 KCMF1Q9P0J7 381 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 MSRAQ9UJ68 235 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 SLC12A4Q9UP95 1085 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 LIMCH1Q9UPQ0 1083 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 PCDHA3Q9Y5H8 950 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 USP16Q9Y5T5 823 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 PLXNA3P51805 1871 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF638Q14966 1978 aaKnown RBP2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 PFASO15067 1338 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 PNPLA7Q6ZV29 1317 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 NLRC5Q86WI3 1866 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 B4E1Z4 1266 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 PPP6R2O75170 966 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 APPP05067 770 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 POU3F3P20264 500 aaPredicted RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ALDH1B1P30837 517 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 MORC3Q14149 939 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 BRD3Q15059 726 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ELAVL1Q15717 326 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 CLEC14AQ86T13 490 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 EGFL6Q8IUX8 553 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 CMIPQ8IY22 773 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 SMC1BQ8NDV3 1235 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZCRB1Q8TBF4 217 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 BICD2Q8TD16 824 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 MMRN2Q9H8L6 949 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ACSS2Q9NR19 701 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 CALCOCO1Q9P1Z2 691 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 SAE1Q9UBE0 346 aaPredicted RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 NFASCO94856 1347 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 MYO1CO00159 1063 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 FAM20BO75063 409 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ACRV1P26436 265 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 RPS19P39019 145 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 SMAD3P84022 425 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 LRMPQ12912 555 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 FHL2Q14192 279 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 TWISTNBQ3B726 338 aaPredicted RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF627Q7L945 461 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 NIM1KQ8IY84 436 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 VGLL2Q8N8G2 317 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 PIK3C3Q8NEB9 887 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 HMG20BQ9P0W2 317 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 EP400Q96L91 3159 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 NYNRINQ9P2P1 1898 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 CTAGE5O15320 804 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 TP73O15350 636 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 COQ9O75208 318 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 TAF5LO75529 589 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 NPTXRO95502 500 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ID4P47928 161 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 HMGA2P52926 109 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 EVA1CP58658 441 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 POU5F1Q01860 360 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 CD69Q07108 199 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ADCY2Q08462 1091 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 LMOD3Q0VAK6 560 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 TCEA2Q15560 299 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ARHGAP44Q17R89 818 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 LSM12Q3MHD2 195 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 PABPC1LQ4VXU2 614 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 PLEKHG4Q58EX7 1191 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 ASRGL1Q7L266 308 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 FOXP4Q8IVH2 680 aaPredicted RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 TXLNBQ8N3L3 684 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 UBR7Q8N806 425 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 SMCR8Q8TEV9 937 aaPredicted RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 TRIM44Q96DX7 344 aaPredicted RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 PNKPQ96T60 521 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 SYT11Q9BT88 431 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 MRIQ9BWK5 157 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 KRTAP17-1Q9BYP8 105 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 C17orf75Q9HAS0 396 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 DDX56Q9NY93 547 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 MYO1AQ9UBC5 1043 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 SRRDQ9UH36 339 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 SLC12A6Q9UHW9 1150 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 PPP2R3BQ9Y5P8 575 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 DDX49Q9Y6V7 483 aaKnown RBP2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 PLXNA4Q9HCM2 1894 aa2.86□□□□□ -1.95
CDC42EP3-205ENST00000494083 TMCO5BA8MYB1 307 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 PJA2O43164 708 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 SLU7O95391 586 aaKnown RBP2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 HK1P19367 917 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 MCCP23508 829 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 ACTN2P35609 894 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 CLCN2P51788 898 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 GSDMDP57764 484 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 DRP2Q13474 957 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 EPHA7Q15375 998 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 USP41Q3LFD5 358 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 KRT40Q6A162 431 aa2.85□□□□□ -1.95
CDC42EP3-205ENST00000494083 KANSL1Q7Z3B3 1105 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms