RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 CNTN3Q9P232 1028 aa8.21□□□□□ -1.1
RBM39-238ENST00000493853 DNMT3BQ9UBC3 853 aaKnown RBP8.21□□□□□ -1.1
RBM39-238ENST00000493853 KCNH3Q9ULD8 1083 aa8.21□□□□□ -1.1
RBM39-238ENST00000493853 ODF2LQ9ULJ1 636 aa8.21□□□□□ -1.1
RBM39-238ENST00000493853 SIT1Q9Y3P8 196 aa8.21□□□□□ -1.1
RBM39-238ENST00000493853 NPHP3-ACAD11A0A0J9YXS1 232 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 VPS37CA5D8V6 355 aaPredicted RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 ANHXE9PGG2 379 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 ZNF197O14709 1029 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 HNRNPDLO14979 420 aaKnown RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 TBCAO75347 108 aaKnown RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 PAPLNO95428 1278 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 ALBP02768 609 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 CPB1P15086 417 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 ATF2P15336 505 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 NPR3P17342 541 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 PDCP20941 246 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 SCP2P22307 547 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 PROZP22891 400 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 IGFBP6P24592 240 aaPredicted RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 ABCD1P33897 745 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 LONP1P36776 959 aaKnown RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 SLC12A3P55017 1021 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 PFKPQ01813 784 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 ROR1Q01973 937 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 PPP2R3AQ06190 1150 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 SOX4Q06945 474 aaPredicted RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 MCL1Q07820 350 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 COX20Q5RI15 118 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 CYP4A22Q5TCH4 519 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 TMEM164Q5U3C3 297 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 TPGS2Q68CL5 300 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 CWF19L1Q69YN2 538 aaKnown RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 ZNF280DQ6N043 979 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 FRMD5Q7Z6J6 570 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 C3orf58Q8NDZ4 430 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 KCNG4Q8TDN1 519 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 ING5Q8WYH8 240 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 FGF14Q92915 247 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 NKD2Q969F2 451 aaPredicted RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 C18orf25Q96B23 403 aaPredicted RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 MCRS1Q96EZ8 462 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 ZNF512Q96ME7 567 aaPredicted RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 ZMAT2Q96NC0 199 aaKnown RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 TBC1D32Q96NH3 1257 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 CORO1BQ9BR76 489 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 RPF1Q9H9Y2 349 aaKnown RBP8.2□□□□□ -1.1
RBM39-238ENST00000493853 PLEKHA5Q9HAU0 1116 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 PARVGQ9HBI0 331 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 SLC2A4RGQ9NR83 387 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 HCFC1R1Q9NWW0 138 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 SLC6A14Q9UN76 642 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 TRIOO75962 3097 aa8.2□□□□□ -1.1
RBM39-238ENST00000493853 WDR81Q562E7 1941 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 PROB1E7EW31 1015 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 K7ENM7 598 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 ABLIM3O94929 683 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 PROCP04070 461 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 DCNP07585 359 aaKnown RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 RHOP08100 348 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 POU2F2P09086 479 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 NBL1P41271 181 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 NCKAP1LP55160 1127 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 GPC5P78333 572 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 SPAG1Q07617 926 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 SNW1Q13573 536 aaKnown RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 SF3A1Q15459 793 aaKnown RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 OCLNQ16625 522 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 SLC10A6Q3KNW5 377 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 TMEM119Q4V9L6 283 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 SLC8B1Q6J4K2 584 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 PHLDB3Q6NSJ2 640 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 CD300LGQ6UXG3 332 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 RSPO2Q6UXX9 243 aaPredicted RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 DSTYKQ6XUX3 929 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 PDZD4Q76G19 769 aaPredicted RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 TCEAL8Q8IYN2 117 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 BEST2Q8NFU1 509 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 ITFG1Q8TB96 612 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 LARP4BQ92615 738 aaKnown RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 KXD1Q9BQD3 176 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 REEP2Q9BRK0 252 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 MKNK1Q9BUB5 465 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 MSTO1Q9BUK6 570 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 RPP25Q9BUL9 199 aaKnown RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 DNAJB12Q9NXW2 375 aaKnown RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 GDE1Q9NZC3 331 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 CCDC39Q9UFE4 941 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 FBXL5Q9UKA1 691 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 MAFFQ9ULX9 164 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 TBX20Q9UMR3 447 aa8.19□□□□□ -1.1
RBM39-238ENST00000493853 UBQLN1Q9UMX0 589 aaKnown RBP8.19□□□□□ -1.1
RBM39-238ENST00000493853 KANSL1LA0AUZ9 987 aa8.18□□□□□ -1.1
RBM39-238ENST00000493853 ARHGEF37A1IGU5 675 aa8.18□□□□□ -1.1
RBM39-238ENST00000493853 WDR27A2RRH5 827 aa8.18□□□□□ -1.1
RBM39-238ENST00000493853 LACTBL1A8MY62 500 aa8.18□□□□□ -1.1
RBM39-238ENST00000493853 C1QTNF9BB2RNN3 333 aa8.18□□□□□ -1.1
RBM39-238ENST00000493853 ABLIM1O14639 778 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms