RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 H3BRJ5 948 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 TNFAIP8O95379 198 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 KRT7P08729 469 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CCNCP24863 283 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 YARSP54577 528 aaKnown RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 NR1H2P55055 460 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 NCKAP1LP55160 1127 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MRPS15P82914 257 aaKnown RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 NIPAL4Q0D2K0 466 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GNA13Q14344 377 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ALX1Q15699 326 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MEA1Q16626 185 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SLC27A3Q5K4L6 730 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 NXNQ6DKJ4 435 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 RALGPS2Q86X27 583 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SNX32Q86XE0 403 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ELMOD1Q8N336 334 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 EIF1ADQ8N9N8 165 aaKnown RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 OXER1Q8TDS5 423 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CTRCQ99895 268 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 RTFDC1Q9BY42 306 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 B3GNT4Q9C0J1 378 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CSRNP2Q9H175 543 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 FAM217BQ9NTX9 383 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 RWDD2AQ9UIY3 292 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PHIPQ8WWQ0 1821 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GOLGA8QA0A0J9YX86 632 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GOLGA8OA6NCC3 632 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GOLGA8NF8WBI6 632 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC188H7C350 402 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GOLGA8RI6L899 631 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 KPNA4O00629 521 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MYO1DO94832 1006 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ATF4P18848 351 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MX2P20592 715 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PHC1P78364 1004 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PPP2R2BQ00005 443 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 DPYDQ12882 1025 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 AUHQ13825 339 aaKnown RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MCMDC2Q4G0Z9 681 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SFT2D3Q587I9 215 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MDH1BQ5I0G3 518 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 TTI2Q6NXR4 508 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 XKR5Q6UX68 686 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 RIPOR1Q6ZS17 1223 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GPR141Q7Z602 305 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MICU3Q86XE3 530 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 REM2Q8IYK8 340 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CLIP4Q8N3C7 705 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CSGALNACT2Q8N6G5 542 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 WASF1Q92558 559 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC124Q96CT7 223 aaKnown RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 TUBB6Q9BUF5 446 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MAN1C1Q9NR34 630 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ARMCX3Q9UH62 379 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GDAQ9Y2T3 454 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 RWDD3Q9Y3V2 267 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PCDHGA11Q9Y5H2 935 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 A0A1W2PQC6 194 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 INO80B-WBP1J3KQ70 363 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PSMA7O14818 248 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 EYA4O95677 639 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 T-ENOLP0DO92 83 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 TGFB3P10600 412 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PCP11498 1178 aaKnown RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 CRABP2P29373 138 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 BLVRAP53004 296 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 GJA9P57773 515 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 IRX4P78413 519 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 IFIT5Q13325 482 aaKnown RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ACVR2BQ13705 512 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PTK2BQ14289 1009 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 NONOQ15233 471 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PPP2R5EQ16537 467 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 FAM182BQ5T319 152 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 KIF6Q6ZMV9 814 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 DGLUCYQ7Z3D6 616 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ANKLE1Q8NAG6 615 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 FBXO25Q8TCJ0 367 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ACTRT1Q8TDG2 376 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PEX13Q92968 403 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ATP2A3Q93084 1043 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 RMDN1Q96DB5 314 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 GJD4Q96KN9 370 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 AIFM2Q9BRQ8 373 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 HERC2P3Q9BVR0 1158 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF277Q9NRM2 450 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 USP21Q9UK80 565 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PPM1HQ9ULR3 514 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 IFT52Q9Y366 437 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 NUMBLQ9Y6R0 609 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 C1orf232A0A0U1RR37 186 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 MAN1A2O60476 641 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ZBED4O75132 1171 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SRGAP2CP0DJJ0 459 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SRGAP2BP0DMP2 458 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ITGA6P23229 1130 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF135P52742 658 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 EPHB1P54762 984 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms