RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 SLC8A3P57103 927 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 WDR5P61964 334 aaKnown RBP8.53□□□□□ -1.04
FDPS-218ENST00000492887 NOMO3P69849 1222 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 TSPY1Q01534 308 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 BTG3Q14201 252 aaPredicted RBP8.53□□□□□ -1.04
FDPS-218ENST00000492887 TIGD5Q53EQ6 642 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 MDH1BQ5I0G3 518 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 DENND1BQ6P3S1 775 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 PSRC1Q6PGN9 363 aaPredicted RBP8.53□□□□□ -1.04
FDPS-218ENST00000492887 PHLDB2Q86SQ0 1253 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 OSTM1Q86WC4 334 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 ERICH1Q86X53 443 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 PALB2Q86YC2 1186 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 COLGALT2Q8IYK4 626 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 KIF18AQ8NI77 898 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 UBA3Q8TBC4 463 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 RSPH1Q8WYR4 309 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 CYFIP2Q96F07 1278 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 CASD1Q96PB1 797 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 PCDHB18PQ96TA0 734 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 TMEM175Q9BSA9 504 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 SELENOOQ9BVL4 669 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 LACRTQ9GZZ8 138 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 THAP2Q9H0W7 228 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 MTIF3Q9H2K0 278 aaKnown RBP8.53□□□□□ -1.04
FDPS-218ENST00000492887 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 KCND1Q9NSA2 647 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 ADAM22Q9P0K1 906 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 HCSTQ9UBK5 93 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 CNOT8Q9UFF9 292 aaKnown RBP8.53□□□□□ -1.04
FDPS-218ENST00000492887 TSPAN16Q9UKR8 245 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 INTUQ9ULD6 942 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 PCDHB8Q9UN66 801 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 CNTN6Q9UQ52 1028 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 COLQQ9Y215 455 aaPredicted RBP8.53□□□□□ -1.04
FDPS-218ENST00000492887 NCANO14594 1321 aa8.53□□□□□ -1.04
FDPS-218ENST00000492887 SF3B1O75533 1304 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■■■■■ 26.9
FDPS-218ENST00000492887 RCCD1A6NED2 376 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 GOLGA8SH3BPF8 625 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 NRP1O14786 923 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 INPPL1O15357 1258 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 LSM8O95777 96 aaKnown RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 TUBB4AP04350 444 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 CALB1P05937 261 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 GZMAP12544 262 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 ITGB8P26012 769 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 ARHGAP25P42331 645 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 SLC11A1P49279 550 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 RGS7P49802 495 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 CDR1P51861 262 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 BCAT1P54687 386 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 GPC5P78333 572 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 CENPCQ03188 943 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 YWHAHQ04917 246 aaPredicted RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 ELAVL2Q12926 359 aaKnown RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 PTPROQ16827 1216 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 PPP1R26Q5T8A7 1209 aaPredicted RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 OVOS1Q6IE37 1185 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 DNAJC24Q6P3W2 148 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 MMS22LQ6ZRQ5 1243 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 TMCO2Q7Z6W1 182 aaPredicted RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 RHOT2Q8IXI1 618 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 C12orf29Q8N999 325 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 B3GALNT2Q8NCR0 500 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 TRIM58Q8NG06 486 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 ZNF564Q8TBZ8 553 aaPredicted RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 WHAMMQ8TF30 809 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 KBTBD7Q8WVZ9 684 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 RFFLQ8WZ73 363 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 TFAP2BQ92481 460 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 ARHGEF26Q96DR7 871 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 NAPGQ99747 312 aaPredicted RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 NUP85Q9BW27 656 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 IRX2Q9BZI1 471 aaPredicted RBP8.52□□□□□ -1.05
FDPS-218ENST00000492887 ADAM28Q9UKQ2 775 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 CDH9Q9ULB4 789 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 KIAA1257Q9ULG3 409 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 PCDHGC3Q9UN70 934 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.52□□□□□ -1.05
FDPS-218ENST00000492887 STXBP5LQ9Y2K9 1186 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 SCINQ9Y6U3 715 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 ATG2AQ2TAZ0 1938 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 DENND4CQ5VZ89 1909 aa8.52□□□□□ -1.05
FDPS-218ENST00000492887 OBSL1O75147 1896 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 COL4A6Q14031 1691 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 CTAGE9A4FU28 777 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 F8W810 466 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 TMEM189-UBE2V1I3L0A0 370 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 O00370 1275 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 PIK3R2O00459 728 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 B4GALT3O60512 393 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 ATP2C2O75185 946 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 URI1O94763 535 aaPredicted RBP8.51□□□□□ -1.05
FDPS-218ENST00000492887 ABL1P00519 1130 aa8.51□□□□□ -1.05
FDPS-218ENST00000492887 CYP1A1P04798 512 aaPredicted RBP8.51□□□□□ -1.05
FDPS-218ENST00000492887 ITGB1P05556 798 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms