RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PIGRP01833 764 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 GJA4P35212 333 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 TUFMP49411 452 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 SMTNP53814 917 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 TMEM119Q4V9L6 283 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 SCARA3Q6AZY7 606 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 UNQ6494/PRO21346Q6UXR6 183 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 RPLP0P6Q8NHW5 317 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 SLC22A12Q96S37 553 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 FIZ1Q96SL8 496 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 LLPHQ9BRT6 129 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 EDEM2Q9BV94 578 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 RAB34Q9BZG1 259 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 RPF1Q9H9Y2 349 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 TDP1Q9NUW8 608 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 THG1LQ9NWX6 298 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 NOL7Q9UMY1 257 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 PATE3B3GLJ2 98 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 ANKRD63C9JTQ0 380 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 PLA2G4BP0C869 781 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 NOVA1P51513 510 aaKnown RBP14.3□□□□□ -0.12
USF1-206ENST00000491629 CREB5Q02930 508 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 COL9A2Q14055 689 aaPredicted RBP14.3□□□□□ -0.12
USF1-206ENST00000491629 SDHAF4Q5VUM1 108 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 WSCD1Q658N2 575 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 SYT13Q7L8C5 426 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 KDF1Q8NAX2 398 aaPredicted RBP14.3□□□□□ -0.12
USF1-206ENST00000491629 BICD1Q96G01 975 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 TSPAN18Q96SJ8 248 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 REEP2Q9BRK0 252 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 IKZF4Q9H2S9 585 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 EBF1Q9UH73 591 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 LIMCH1Q9UPQ0 1083 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 INVSQ9Y283 1065 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 CELSR3Q9NYQ7 3312 aa14.3□□□□□ -0.12
USF1-206ENST00000491629 LOC400499M0QZD8 3231 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 LAD1O00515 517 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 CYB561D2O14569 222 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 CDX4O14627 284 aaPredicted RBP14.29□□□□□ -0.12
USF1-206ENST00000491629 HNRNPDLO14979 420 aaKnown RBP14.29□□□□□ -0.12
USF1-206ENST00000491629 XPOTO43592 962 aaKnown RBP14.29□□□□□ -0.12
USF1-206ENST00000491629 CAVIN2O95810 425 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 DRD1P21728 446 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 AVPR1AP37288 418 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 LIG4P49917 911 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
USF1-206ENST00000491629 DMC1Q14565 340 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 TMEM132DQ14C87 1099 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 VEPH1Q14D04 833 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 PTPAQ15257 358 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 CCDC142Q17RM4 750 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 MON1AQ86VX9 555 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 SPPL2BQ8TCT7 592 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 CYP2S1Q96SQ9 504 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 P2RY13Q9BPV8 354 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 PYM1Q9BRP8 204 aaKnown RBP14.29□□□□□ -0.12
USF1-206ENST00000491629 MSTO1Q9BUK6 570 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 CCSER1Q9C0I3 900 aa14.29□□□□□ -0.12
USF1-206ENST00000491629 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
USF1-206ENST00000491629 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.29□□□□□ -0.12
USF1-206ENST00000491629 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
USF1-206ENST00000491629 BCKDHBP21953 392 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 ACOT2P49753 483 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 ZNF131P52739 623 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 WNT7BP56706 349 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 ATP2C1P98194 919 aaPredicted RBP14.28□□□□□ -0.12
USF1-206ENST00000491629 ZNF252P-AS1Q0IIN9 211 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 FOXC1Q12948 553 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 ZNF268Q14587 947 aaPredicted RBP14.28□□□□□ -0.12
USF1-206ENST00000491629 ZNF77Q15935 545 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 KYAT1Q16773 422 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 SH3PXD2AQ5TCZ1 1133 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 PMS2CLQ68D20 193 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 CRELD2Q6UXH1 353 aaPredicted RBP14.28□□□□□ -0.12
USF1-206ENST00000491629 EFCAB13Q8IY85 973 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 C2orf15Q8WU43 125 aaKnown RBP14.28□□□□□ -0.12
USF1-206ENST00000491629 GATA6Q92908 595 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 GCNAQ96QF7 691 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 ECT2Q9H8V3 914 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 SH2B1Q9NRF2 756 aaPredicted RBP14.28□□□□□ -0.12
USF1-206ENST00000491629 KCND2Q9NZV8 630 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 LARSQ9P2J5 1176 aaKnown RBP14.28□□□□□ -0.12
USF1-206ENST00000491629 KCNG1Q9UIX4 513 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 DERAQ9Y315 318 aa14.28□□□□□ -0.12
USF1-206ENST00000491629 IGSF10Q6WRI0 2623 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 APBB3O95704 486 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 CHRM1P11229 460 aaPredicted RBP14.27□□□□□ -0.13
USF1-206ENST00000491629 HNRNPLP14866 589 aaKnown RBP eCLIP14.27□□□□□ -0.13
USF1-206ENST00000491629 DDX6P26196 483 aaKnown RBP eCLIP14.27□□□□□ -0.13
USF1-206ENST00000491629 TAF6P49848 677 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 BFSP1Q12934 665 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 USP4Q13107 963 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 GAB4Q2WGN9 574 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 EML3Q32P44 896 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 CD302Q8IX05 232 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 ZSWIM2Q8NEG5 633 aa14.27□□□□□ -0.13
USF1-206ENST00000491629 OSCP1Q8WVF1 389 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms