RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ASIC1P78348 528 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 ZXDBP98169 803 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 KYAT1Q16773 422 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 SV2CQ496J9 727 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 RTL10Q7L3V2 364 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 EPM2AIP1Q7L775 607 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-211ENST00000491581 METTL23Q86XA0 190 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 CD302Q8IX05 232 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 GPD1LQ8N335 351 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 SCFD1Q8WVM8 642 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 DNASE1L2Q92874 299 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 USP13Q92995 863 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-211ENST00000491581 CCDC127Q96BQ5 260 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 HVCN1Q96D96 273 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 MRPL45Q9BRJ2 306 aaKnown RBP9.58□□□□□ -0.88
HDAC3-211ENST00000491581 DPEP3Q9H4B8 488 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 EBF3Q9H4W6 596 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 TRPV4Q9HBA0 871 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 SLC39A2Q9NP94 309 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 PARD6AQ9NPB6 346 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 CRTAC1Q9NQ79 661 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 HPS4Q9NQG7 708 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 KBTBD4Q9NVX7 518 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 HSPBP1Q9NZL4 362 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 SEL1LQ9UBV2 794 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 SERTAD1Q9UHV2 236 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 DNAH14Q0VDD8 3507 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 CACNA1HO95180 2353 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 MED19A0JLT2 244 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-211ENST00000491581 C2orf78A6NCI8 922 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 CHURC1-FNTBB4DL54 471 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 SPECC1L-ADORA2AF8WAN1 911 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 CLDN5O00501 218 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 MICAL2O94851 1124 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 IL18RAPO95256 599 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 F13A1P00488 732 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 ZSCAN22P10073 491 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-211ENST00000491581 DLATP10515 647 aaKnown RBP9.57□□□□□ -0.88
HDAC3-211ENST00000491581 GARTP22102 1010 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 CTHP32929 405 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 FNTBP49356 437 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 FCHO2Q0JRZ9 810 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 ORC1Q13415 861 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 CCDC6Q16204 474 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 INTS6LQ5JSJ4 861 aaKnown RBP9.57□□□□□ -0.88
HDAC3-211ENST00000491581 SFTPA1Q8IWL2 248 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 SCN4BQ8IWT1 228 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 CCDC65Q8IXS2 484 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 YAF2Q8IY57 180 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 ADGRF2Q8IZF7 708 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 THEM5Q8N1Q8 247 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 EZH1Q92800 747 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-211ENST00000491581 IRF7Q92985 503 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 ZSCAN16Q9H4T2 348 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-211ENST00000491581 TRPC7Q9HCX4 862 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 PRMT8Q9NR22 394 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-211ENST00000491581 AGPAT3Q9NRZ7 376 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 GKN1Q9NS71 199 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 INTS13Q9NVM9 706 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 ZDHHC9Q9Y397 364 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 PCDHB5Q9Y5E4 795 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
HDAC3-211ENST00000491581 KLRC4O43908 158 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 CUTAO60888 179 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 PPP6R2O75170 966 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 TMEM191BP0C7N4 346 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 BDNFP23560 247 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 ID4P47928 161 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 CDH8P55286 799 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 DLG4P78352 724 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 EHHADHQ08426 723 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 IFRD2Q12894 506 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-211ENST00000491581 POSTNQ15063 836 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 CMTM8Q8IZV2 173 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 ARL14EPQ8N8R7 260 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-211ENST00000491581 ZBTB44Q8NCP5 570 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 ZNF507Q8TCN5 953 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 BPIFB1Q8TDL5 484 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 CSGALNACT1Q8TDX6 532 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 DEPDC1BQ8WUY9 529 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 NELL1Q92832 810 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 MYLPFQ96A32 169 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 HPDLQ96IR7 371 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 ZNF560Q96MR9 790 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 SDCBP2Q9H190 292 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 TNMDQ9H2S6 317 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 CHRDQ9H2X0 955 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 TASP1Q9H6P5 420 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 EXOC7Q9UPT5 735 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 WNT6Q9Y6F9 365 aa9.56□□□□□ -0.88
HDAC3-211ENST00000491581 PIEZO1Q92508 2521 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 A0A1B0GVL5 298 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 K7ESF4 209 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 DPYSL4O14531 572 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 GABRDO14764 452 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 CHADO15335 359 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 HRO43593 1189 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 ACTN4O43707 911 aaKnown RBP9.55□□□□□ -0.88
HDAC3-211ENST00000491581 KINO60870 393 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms