RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 NT5C1BQ96P26 610 aa20.34■□□□□ 0.85
SNAPC3-206ENST00000490969 TSSK1BQ9BXA7 367 aa20.34■□□□□ 0.85
SNAPC3-206ENST00000490969 UBE2OQ9C0C9 1292 aaKnown RBP20.34■□□□□ 0.85
SNAPC3-206ENST00000490969 LIASO43766 372 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 CAP2P40123 477 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 MORF4L2Q15014 288 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 KRT39Q6A163 491 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 CENPUQ71F23 418 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 ARHGAP24Q8N264 748 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 GMCL1P1Q8NEA9 526 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 CPA5Q8WXQ8 436 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 ELMO3Q96BJ8 720 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 LXNQ9BS40 222 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 SPATA16Q9BXB7 569 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 ALG13Q9NP73 1137 aaKnown RBP20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 SLC17A7Q9P2U7 560 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 DNPEPQ9ULA0 475 aa20.33■□□□□ 0.85
SNAPC3-206ENST00000490969 TM9SF1O15321 606 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 CYP1A1P04798 512 aaPredicted RBP20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 KRT5P13647 590 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 ETS1P14921 441 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 RANBP1P43487 201 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 NOP14P78316 857 aaKnown RBP20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 MCL1Q07820 350 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 PDIA2Q13087 525 aaKnown RBP20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 ALCAMQ13740 583 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 PADI6Q6TGC4 694 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 NCSTNQ92542 709 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 SPON1Q9HCB6 807 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 ZNF148Q9UQR1 794 aa20.33■□□□□ 0.84
SNAPC3-206ENST00000490969 ATP2A1O14983 1001 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 GPC3P51654 580 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 RAP1GDS1P52306 607 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 EFTUD2Q15029 972 aaKnown RBP eCLIP20.32■□□□□ 0.842e-6■■■■□ 23.1
SNAPC3-206ENST00000490969 RFX8Q6ZV50 586 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 TTC7BQ86TV6 843 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 EXD1Q8NHP7 514 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 CCDC127Q96BQ5 260 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 TUBGCP5Q96RT8 1024 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 NDNQ99608 321 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 VCX3BQ9H321 246 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 UNC45AQ9H3U1 944 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 VCX3AQ9NNX9 186 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 GPX6P59796 221 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 ZC3H12AQ5D1E8 599 aaKnown RBP20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 NBPF12Q5TAG4 269 aaPredicted RBP20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 ARMC3Q5W041 872 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 IZUMO2Q6UXV1 221 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 TRIM11Q96F44 468 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 GMCL1Q96IK5 515 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 FAM161BQ96MY7 647 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 CCDC28BQ9BUN5 200 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 RABGEF1Q9UJ41 708 aa20.32■□□□□ 0.84
SNAPC3-206ENST00000490969 GOLGA8RI6L899 631 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 TBC1D12O60347 775 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 RPS12P25398 132 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 DSG1Q02413 1049 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 EAPPQ56P03 285 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 CBWD2Q8IUF1 395 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 ANKMY2Q8IV38 441 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 BANPQ8N9N5 519 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 COQ4Q9Y3A0 265 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 SLC4A7Q9Y6M7 1214 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 F8W8V4 182 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 PDLIM1O00151 329 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 BANF1O75531 89 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 TGDSO95455 350 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 DLDP09622 509 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 ANPEPP15144 967 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 RTP1P59025 263 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 MAP3K10Q02779 954 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 RNASEH2BQ5TBB1 312 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 ALLCQ8N6M5 410 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 TAS1R2Q8TE23 839 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 KLF6Q99612 283 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 DEFB129Q9H1M3 183 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 ARHGEF4Q9NR80 690 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 USTQ9Y2C2 406 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 TMX2Q9Y320 296 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 MYPNQ86TC9 1320 aa20.31■□□□□ 0.84
SNAPC3-206ENST00000490969 FCHO1O14526 889 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 MAPTP10636 758 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 HIRAP54198 1017 aaPredicted RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 KAZNQ674X7 775 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 MZB1Q8WU39 189 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 OPTNQ96CV9 577 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 OXNAD1Q96HP4 312 aaPredicted RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 ECSITQ9BQ95 431 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 RANBP17Q9H2T7 1088 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 TMEM8AQ9HCN3 771 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 FBXO28Q9NVF7 368 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 KLHL11Q9NVR0 708 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 FETUBQ9UGM5 382 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 SHOC2Q9UQ13 582 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 POLR2AP24928 1970 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 ZNF536O15090 1300 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms