RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ADSSP30520 456 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PSMC2P35998 433 aaKnown RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 GLUD2P49448 558 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 DSG1Q02413 1049 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 NHLH1Q02575 133 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 UBXN1Q04323 297 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PRPF4BQ13523 1007 aaKnown RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 MAPK6Q16659 721 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 FAM187BQ17R55 369 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 USP41Q3LFD5 358 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 SPECC1LQ69YQ0 1117 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 ITIH6Q6UXX5 1313 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PHLPP2Q6ZVD8 1323 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PALB2Q86YC2 1186 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 GLYCTKQ8IVS8 523 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 SUGP1Q8IWZ8 645 aaKnown RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 FAM186BQ8IYM0 893 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 RNF168Q8IYW5 571 aaPredicted RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 ZDHHC14Q8IZN3 488 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 ZSWIM2Q8NEG5 633 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PAAF1Q9BRP4 392 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 C2orf40Q9H1Z8 148 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 CXCL16Q9H2A7 254 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 NDST4Q9H3R1 872 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 SMOC2Q9H3U7 446 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PCIF1Q9H4Z3 704 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 PDZD7Q9H5P4 517 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 SFXN1Q9H9B4 322 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 RXFP1Q9HBX9 757 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 METTL14Q9HCE5 456 aaKnown RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 CHST7Q9NS84 486 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 HSPBP1Q9NZL4 362 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 SCHIP1Q9P0W5 487 aaPredicted RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 CACNG4Q9UBN1 327 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 ARMCX3Q9UH62 379 aaPredicted RBP8.16□□□□□ -1.1
CLDN1-202ENST00000490800 SORCS3Q9UPU3 1222 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
CLDN1-202ENST00000490800 A0A1W2PQC6 194 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 CASTOR2A6NHX0 329 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 PES1O00541 588 aaKnown RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 PTGESO14684 152 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 HNRNPDLO14979 420 aaKnown RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 MAPK13O15264 365 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 EXOC3O60645 756 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 ABL1P00519 1130 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 RPL17P18621 184 aaKnown RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 GARTP22102 1010 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 AVPR2P30518 371 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 EFNA5P52803 228 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 VCPP55072 806 aaKnown RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 GSDMDP57764 484 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 GRIK3Q13003 919 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 STRN3Q13033 797 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 TUSC3Q13454 348 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 MTMR3Q13615 1198 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 HSP90AA2PQ14568 343 aaPredicted RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 EEF1DP3Q658K8 133 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 ARMCX5Q6P1M9 558 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 FUT10Q6P4F1 479 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 TDRD5Q8NAT2 981 aaKnown RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 XXYLT1Q8NBI6 393 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 PRSS33Q8NF86 280 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 C1orf216Q8TAB5 229 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 RIN2Q8WYP3 895 aaPredicted RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 ACSF2Q96CM8 615 aaPredicted RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 TRIM44Q96DX7 344 aaPredicted RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 BICD1Q96G01 975 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 ZNF830Q96NB3 372 aaPredicted RBP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 ERGIC2Q96RQ1 377 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 KCNF1Q9H3M0 494 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 MAN1C1Q9NR34 630 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 ADAM28Q9UKQ2 775 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 FRMD4BQ9Y2L6 1034 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.15□□□□□ -1.1
CLDN1-202ENST00000490800 USP3Q9Y6I4 520 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 STYXL1Q9Y6J8 313 aa8.15□□□□□ -1.1
CLDN1-202ENST00000490800 GOLGA8IPA6NC78 632 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 GOLGA8JA6NMD2 632 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 TGM5O43548 720 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 RFPL2O75678 378 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 RECQL4O94761 1208 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 GLUD1P00367 558 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 THP07101 528 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 ADRB2P07550 413 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 IGFBP6P24592 240 aaPredicted RBP8.14□□□□□ -1.11
CLDN1-202ENST00000490800 KLK7P49862 253 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 LIG4P49917 911 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 FOXK2Q01167 660 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 PPP2R3AQ06190 1150 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 GOLGA8FQ08AF8 430 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 GOLGA8DPQ0D2H9 430 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 SYCP1Q15431 976 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 NAB2Q15742 525 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 RTP2Q5QGT7 225 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 FKBP15Q5T1M5 1219 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 LILRA6Q6PI73 481 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 PRSS55Q6UWB4 352 aaPredicted RBP8.14□□□□□ -1.11
CLDN1-202ENST00000490800 ZPBP2Q6X784 338 aa8.14□□□□□ -1.11
CLDN1-202ENST00000490800 C15orf39Q6ZRI6 1047 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms