RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
PRPF4B-207ENST00000490399 MS4A7Q9GZW8 240 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-207ENST00000490399 INTS13Q9NVM9 706 aa5.54□□□□□ -1.52
PRPF4B-207ENST00000490399 TBCCD1Q9NVR7 557 aa5.54□□□□□ -1.52
PRPF4B-207ENST00000490399 NEU2Q9Y3R4 380 aa5.54□□□□□ -1.52
PRPF4B-207ENST00000490399 SNX13Q9Y5W8 968 aa5.54□□□□□ -1.52
PRPF4B-207ENST00000490399 COL4A3Q01955 1670 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 A0A0B4J269 797 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 ISM1B1AKI9 464 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 E7ENX8 843 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 F8W8V4 182 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 hCG_1984214I3L0E3 225 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 PPP3CBP16298 524 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 KRT4P19013 534 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 ITGALP20701 1170 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 PIK3CBP42338 1070 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 TAP2Q03519 686 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 TUBB3Q13509 450 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 IQCB1Q15051 598 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 RBM20Q5T481 1227 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 DCAF12L1Q5VU92 463 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 IL31Q6EBC2 164 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 ZDHHC24Q6UX98 284 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 MICU3Q86XE3 530 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 BEND2Q8NDZ0 799 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 PARD3BQ8TEW8 1205 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 FUBP1Q96AE4 644 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 SUCLG2Q96I99 432 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 TBCBQ99426 244 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 NAA15Q9BXJ9 866 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 SLITRK6Q9H5Y7 841 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 COL20A1Q9P218 1284 aa5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 AFF4Q9UHB7 1163 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 MRPS17Q9Y2R5 130 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-207ENST00000490399 TRIM43BA6NCK2 446 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 KPNA5O15131 536 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 MYL1P05976 194 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 PDHA1P08559 390 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 NEK3P51956 506 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 FSTL1Q12841 308 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 RAB32Q13637 225 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 HLTFQ14527 1009 aaKnown RBP eCLIP5.52□□□□□ -1.533e-6■■■□□ 17.4
PRPF4B-207ENST00000490399 HLXQ14774 488 aaPredicted RBP5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 ABHD17BQ5VST6 288 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 LAYNQ6UX15 382 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 Q6YL49 198 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 CCDC146Q8IYE0 955 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 TOR1AIP2Q8NFQ8 470 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 TRIM43Q96BQ3 446 aaPredicted RBP5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 AIFM2Q9BRQ8 373 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 ZNF518BQ9C0D4 1074 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 NUP62CLQ9H1M0 184 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 CYP4F11Q9HBI6 524 aa5.52□□□□□ -1.53
PRPF4B-207ENST00000490399 SPATA31A3Q5VYP0 1347 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 GRID2IPA4D2P6 1211 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 RHPN2P1A8MT19 583 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 OVOL3O00110 214 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 NBPF7P0C2Y1 421 aaPredicted RBP5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 ATXN1LP0C7T5 689 aaKnown RBP5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 CD6P30203 668 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 PLA2G5P39877 138 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 VIPR2P41587 438 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 PXNP49023 591 aaPredicted RBP5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 SP2Q02086 613 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 ZIK1Q3SY52 487 aaPredicted RBP5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 PLA1AQ53H76 456 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 KRT78Q8N1N4 520 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 MYCBPAPQ8TBZ2 947 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 PHKBQ93100 1093 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 TTPALQ9BTX7 342 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 STK31Q9BXU1 1019 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 ACTRT3Q9BYD9 372 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 TPSD1Q9BZJ3 242 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 AMBRA1Q9C0C7 1298 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 CHST12Q9NRB3 414 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 SYBUQ9NX95 663 aa5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 EPN1Q9Y6I3 576 aaPredicted RBP5.51□□□□□ -1.53
PRPF4B-207ENST00000490399 SALL3Q9BXA9 1300 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 PYCARD-AS1I3L0S3 204 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 YY2O15391 372 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 TRIAP1O43715 76 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 RHOP08100 348 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 PRIM2P49643 509 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 FOXI1Q12951 378 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 ARHGAP40Q5TG30 622 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 KLHDC7AQ5VTJ3 777 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 LAIR1Q6GTX8 287 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 VWA1Q6PCB0 445 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 LIX1LQ8IVB5 337 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 ULK2Q8IYT8 1036 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 LNX2Q8N448 690 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 B3GALNT2Q8NCR0 500 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 CAVIN3Q969G5 261 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 MESP1Q9BRJ9 268 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 KCTD5Q9NXV2 234 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 SERTAD3Q9UJW9 196 aa5.5□□□□□ -1.53
PRPF4B-207ENST00000490399 VWC2LB2RUY7 222 aa5.49□□□□□ -1.53
PRPF4B-207ENST00000490399 PPM1DO15297 605 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms