RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PILRBQ9UKJ0 227 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 COL5A1P20908 1838 aaPredicted RBP7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 C2CD3Q4AC94 2353 aa7.86□□□□□ -1.15
PDLIM1-203ENST00000490391 ATXN2Q99700 1313 aaKnown RBP7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 TRABD2BA6NFA1 517 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 PYCARD-AS1I3L0S3 204 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 INO80B-WBP1J3KQ70 363 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 HIP1O00291 1037 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 ASAP2O43150 1006 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 PRC1O43663 620 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 SH3BP5O60239 455 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 OPHN1O60890 802 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 RECQL4O94761 1208 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 B3GAT3O94766 335 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 DKK1O94907 266 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 VNN2O95498 520 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 RHOQP17081 205 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 DRD1P21728 446 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 WEE1P30291 646 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 HOXD12P35452 270 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 LIFRP42702 1097 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 BRCC3P46736 316 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 CLCNKBP51801 687 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 HNRNPUQ00839 825 aaKnown RBP eCLIP7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 CFHR1Q03591 330 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 MRPL58Q14197 206 aaKnown RBP7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 MAPK6Q16659 721 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 FBXO43Q4G163 708 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 GAREM2Q75VX8 874 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 ARMCX6Q7L4S7 300 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 GLRX5Q86SX6 157 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 MARCH9Q86YJ5 346 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 ELMOD1Q8N336 334 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 MDGA1Q8NFP4 955 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 TSTD1Q8NFU3 115 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 BPIFB1Q8TDL5 484 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 POLR3CQ9BUI4 534 aaPredicted RBP7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 DNAJC25Q9H1X3 360 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 OSBPL3Q9H4L5 887 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 XPNPEP1Q9NQW7 623 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 DNAAF2Q9NVR5 837 aaKnown RBP7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 WRAP73Q9P2S5 460 aaPredicted RBP7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 AFF4Q9UHB7 1163 aaKnown RBP7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 FBXL5Q9UKA1 691 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 PPME1Q9Y570 386 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 TSC2P49815 1807 aa7.85□□□□□ -1.15
PDLIM1-203ENST00000490391 NBASA2RRP1 2371 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 CEP192Q8TEP8 1941 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 ESYT2A0FGR8 921 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 CCDC69A6NI79 296 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 CBFA2T3O75081 653 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 HNRNPLP14866 589 aaKnown RBP eCLIP7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 ITPKAP23677 461 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 RFC5P40937 340 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 P2RY2P41231 377 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 MAP2K3P46734 347 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 MCM2P49736 904 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 RNF144AP50876 292 aaPredicted RBP7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 GALK1P51570 392 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 ARPP19P56211 112 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 PSMC5P62195 406 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 POU5F1BQ06416 359 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 NCBP1Q09161 790 aaKnown RBP7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 RUNX3Q13761 415 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 CAPSQ13938 189 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 EMC2Q15006 297 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 UPP1Q16831 310 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 ANO7Q6IWH7 933 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 NFXL1Q6ZNB6 911 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 MICU3Q86XE3 530 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 TMEFF1Q8IYR6 380 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 REXO1Q8N1G1 1221 aaKnown RBP7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 TMTC2Q8N394 836 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 FRMD1Q8N878 549 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 TSC1Q92574 1164 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 PPP1R10Q96QC0 940 aaKnown RBP7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 GTPBP2Q9BX10 602 aaKnown RBP7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 NFKBIZQ9BYH8 718 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 ZMYND12Q9H0C1 365 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 SUV39H2Q9H5I1 410 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 GKN1Q9NS71 199 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 KIAA1522Q9P206 1035 aaPredicted RBP7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 TBX20Q9UMR3 447 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 SLC6A14Q9UN76 642 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 YIPF1Q9Y548 306 aa7.84□□□□□ -1.15
PDLIM1-203ENST00000490391 ANTXRLA6NF34 631 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 EML1O00423 815 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 TBX3O15119 743 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 CFIP05156 583 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 SERPINF2P08697 491 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 U2AF2P26368 475 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 ATXN3P54252 364 aaPredicted RBP7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 SLC14A1Q13336 389 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 PTPAQ15257 358 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 MAP7D1Q3KQU3 841 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 SPDYCQ5MJ68 293 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 LYSMD4Q5XG99 296 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 TRIM68Q6AZZ1 485 aa7.83□□□□□ -1.16
PDLIM1-203ENST00000490391 CASC1Q6TDU7 716 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms