RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SERHLQ9NQF3 203 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 SHOC2Q9UQ13 582 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.79□□□□□ -1.64
CD46-216ENST00000490278 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.79□□□□□ -1.64
CD46-216ENST00000490278 SPATA31A3Q5VYP0 1347 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 DCLK1O15075 740 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 RASSF9O75901 435 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 FOSP01100 380 aaPredicted RBP4.78□□□□□ -1.64
CD46-216ENST00000490278 MT-ND5P03915 603 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 ADRB1P08588 477 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 TNFSF4P23510 183 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 NDUFV1P49821 464 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 LOXL3P58215 753 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 LILRA4P59901 499 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 HTRA4P83105 476 aaPredicted RBP4.78□□□□□ -1.64
CD46-216ENST00000490278 DGCR2P98153 550 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 TUBA3CQ13748 450 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 HLXQ14774 488 aaPredicted RBP4.78□□□□□ -1.64
CD46-216ENST00000490278 SP5Q6BEB4 398 aaPredicted RBP4.78□□□□□ -1.64
CD46-216ENST00000490278 TUBA3EQ6PEY2 450 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 TOGARAM2Q6ZUX3 1019 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 UNC13DQ70J99 1090 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 SPRED1Q7Z699 444 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 GAS2L3Q86XJ1 694 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 FAM9AQ8IZU1 332 aaPredicted RBP4.78□□□□□ -1.64
CD46-216ENST00000490278 OR2C3Q8N628 320 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 RNF152Q8N8N0 203 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 ACRBPQ8NEB7 543 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 RAPGEF4Q8WZA2 1011 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 PMM1Q92871 262 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 LENG9Q96B70 501 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 SNX22Q96L94 193 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 SGCZQ96LD1 299 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 COLEC11Q9BWP8 271 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 NRDE2Q9H7Z3 1164 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 ZSCAN32Q9NX65 697 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 GPRC5BQ9NZH0 403 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 FNIP2Q9P278 1114 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 RGS17Q9UGC6 210 aaPredicted RBP4.78□□□□□ -1.64
CD46-216ENST00000490278 ITGB1BP2Q9UKP3 347 aa4.78□□□□□ -1.64
CD46-216ENST00000490278 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 UNC119BA6NIH7 251 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 F5H697 171 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 APOL1O14791 398 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 TRIAP1O43715 76 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 LPXNO60711 386 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 SPDEFO95238 335 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 ANXA2P07355 339 aaKnown RBP4.77□□□□□ -1.65
CD46-216ENST00000490278 TXNP10599 105 aaKnown RBP4.77□□□□□ -1.65
CD46-216ENST00000490278 IL1R1P14778 569 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 SERPINB3P29508 390 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 NPTX2P47972 431 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 PXNP49023 591 aaPredicted RBP4.77□□□□□ -1.65
CD46-216ENST00000490278 CARSP49589 748 aaKnown RBP4.77□□□□□ -1.65
CD46-216ENST00000490278 ZNF134P52741 427 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 GUCY1B3Q02153 619 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 KRT17Q04695 432 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 BTKQ06187 659 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 MORC3Q14149 939 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 MGAT5BQ3V5L5 792 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 PLA1AQ53H76 456 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 MIIPQ5JXC2 388 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 IZUMO3Q5VZ72 239 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 TMEM108Q6UXF1 575 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 ARHGEF19Q8IW93 802 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 SDR16C5Q8N3Y7 309 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 ATP11CQ8NB49 1132 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 DEPTORQ8TB45 409 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 IPCEF1Q8WWN9 437 aaPredicted RBP4.77□□□□□ -1.65
CD46-216ENST00000490278 BRI3BPQ8WY22 251 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 FUBP1Q96AE4 644 aaKnown RBP4.77□□□□□ -1.65
CD46-216ENST00000490278 IQCDQ96DY2 449 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 PPP1R9BQ96SB3 815 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 CHST8Q9H2A9 424 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 UNKLQ9H9P5 680 aaKnown RBP4.77□□□□□ -1.65
CD46-216ENST00000490278 XPNPEP3Q9NQH7 507 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 SLC2A4RGQ9NR83 387 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 HDAC9Q9UKV0 1011 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 COMMD10Q9Y6G5 202 aa4.77□□□□□ -1.65
CD46-216ENST00000490278 A0A0B4J269 797 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 CENPVL1A0A0U1RR11 272 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 THAP12O43422 761 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 NCK2O43639 380 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 GATA3P23771 443 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 CD6P30203 668 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 LRPAP1P30533 357 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 TUBB3Q13509 450 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 TP53BP2Q13625 1128 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 LSM12Q3MHD2 195 aaKnown RBP4.76□□□□□ -1.65
CD46-216ENST00000490278 KLHDC7AQ5VTJ3 777 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 SFRP4Q6FHJ7 346 aaPredicted RBP4.76□□□□□ -1.65
CD46-216ENST00000490278 HIBCHQ6NVY1 386 aaPredicted RBP4.76□□□□□ -1.65
CD46-216ENST00000490278 XRRA1Q6P2D8 792 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 ZDHHC24Q6UX98 284 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 RHOUQ7L0Q8 258 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 RNF44Q7L0R7 432 aa4.76□□□□□ -1.65
CD46-216ENST00000490278 YAF2Q8IY57 180 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms