RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 MAP4K5Q9Y4K4 846 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SNX9Q9Y5X1 595 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CEPT1Q9Y6K0 416 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PVALEFA0A1B0GWK0 134 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 B2RBV5 119 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 FAM47E-STBD1D6RA91 191 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 H3BSA7 217 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 EML1O00423 815 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 PFDN6O15212 129 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ITM2AO43736 263 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 CIAO1O76071 339 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 TNFAIP8O95379 198 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ACSL3O95573 720 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 PDGFAP04085 211 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 CD48P09326 243 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 PABPC1P11940 636 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 CDH2P19022 906 aaPredicted RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 ENDOUP21128 410 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 CDH3P22223 829 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 MCM7P33993 719 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 IRS1P35568 1242 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 PRKCIP41743 596 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ZAP70P43403 619 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 EIF2B2P49770 351 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 PSMA6P60900 246 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 ASIC1P78348 528 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 CAV1Q03135 178 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 DMPKQ09013 629 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 DLG1Q12959 904 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 C16orf72Q14CZ0 275 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 TLR1Q15399 786 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 NPY5RQ15761 445 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 SEPT7Q16181 437 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 CNGA3Q16281 694 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ALKBH2Q6NS38 261 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 TREML4Q6UXN2 200 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ANO5Q75V66 913 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF571Q7Z3V5 609 aaPredicted RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 DHDDSQ86SQ9 333 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC25Q86WR0 208 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 WDR75Q8IWA0 830 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 ICA1LQ8NDH6 482 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 TTLL11Q8NHH1 800 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 GPR152Q8TDT2 470 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 GDPD5Q8WTR4 605 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 MAML1Q92585 1016 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF75CPQ92670 426 aaPredicted RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 BORCS5Q969J3 196 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ALKBH8Q96BT7 664 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 PANX3Q96QZ0 392 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 CITED4Q96RK1 184 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 TSG101Q99816 390 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 MYD88Q99836 296 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 GPATCH1Q9BRR8 931 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 TRIM55Q9BYV6 548 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 NAPBQ9H115 298 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ERVK-5Q9HDB9 667 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 VTA1Q9NP79 307 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 TOR4AQ9NXH8 423 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 SENP1Q9P0U3 644 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 KANSL3Q9P2N6 904 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 RSL24D1Q9UHA3 163 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 HERC5Q9UII4 1024 aaKnown RBP5□□□□□ -1.61
SNRNP40-206ENST00000489853 PRELID1Q9Y255 219 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 N6AMT1Q9Y5N5 214 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 NOX1Q9Y5S8 564 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 SLIT3O75094 1523 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM131LA2VDJ0 1609 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 PHLPP1O60346 1717 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 WNK3Q9BYP7 1800 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 NWD1Q149M9 1564 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 ACEP12821 1306 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 USP6P35125 1406 aa5□□□□□ -1.61
SNRNP40-206ENST00000489853 EYA2O00167 538 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CASQ2O14958 399 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 DGKIO75912 1065 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CAMTA2O94983 1202 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TGDSO95455 350 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 FCER1AP12319 257 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 MYCLP1P12525 358 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 KRT13P13646 458 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 GNA11P29992 359 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 GNA15P30679 374 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ADD2P35612 726 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 COILP38432 576 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RPIAP49247 311 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RPS3AP61247 264 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 NOP14P78316 857 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CDK16Q00536 496 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ARID5AQ03989 594 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ZBTB16Q05516 673 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PPATQ06203 517 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 E2F2Q14209 437 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SPCS2Q15005 226 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 NONOQ15233 471 aaKnown RBP eCLIP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 UBE3CQ15386 1083 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 CYP1B1Q16678 543 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 EXOC3L4Q17RC7 722 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF829Q3KNS6 432 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms