RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 SLC39A12Q504Y0 691 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 SOWAHCQ53LP3 525 aaPredicted RBP16.49■□□□□ 0.23
NME1-208ENST00000487481 ANO7Q6IWH7 933 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 ZPBP2Q6X784 338 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
NME1-208ENST00000487481 GIPC2Q8TF65 315 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
NME1-208ENST00000487481 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 SENP8Q96LD8 212 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 ZCWPW1Q9H0M4 648 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 KIAA1024Q9UPX6 916 aa16.49■□□□□ 0.23
NME1-208ENST00000487481 TNFRSF10BO14763 440 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 SLC16A4O15374 487 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 F11P03951 625 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 CAPNS1P04632 268 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 CYP11A1P05108 521 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 ENGP17813 658 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 NMT1P30419 496 aaKnown RBP16.48■□□□□ 0.23
NME1-208ENST00000487481 DPP6P42658 865 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 GUCY2FP51841 1108 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 LILRA4P59901 499 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 MAPK7Q13164 816 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 SEMA3BQ13214 749 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 TRIM29Q14134 588 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 MTF1Q14872 753 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 PDZD3Q86UT5 571 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 MDGA1Q8NFP4 955 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 MRPS31Q92665 395 aaKnown RBP16.48■□□□□ 0.23
NME1-208ENST00000487481 TSPAN18Q96SJ8 248 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
NME1-208ENST00000487481 PLXND1Q9Y4D7 1925 aa16.48■□□□□ 0.23
NME1-208ENST00000487481 PPEF2O14830 753 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 HMGA1P17096 107 aaKnown RBP16.47■□□□□ 0.23
NME1-208ENST00000487481 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.23
NME1-208ENST00000487481 TXNDC8Q6A555 127 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 MON1AQ86VX9 555 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 SYT12Q8IV01 421 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 USP33Q8TEY7 942 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 SPACA7Q96KW9 195 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
NME1-208ENST00000487481 DUS2Q9NX74 493 aaKnown RBP16.47■□□□□ 0.23
NME1-208ENST00000487481 DSEQ9UL01 958 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 CELSR3Q9NYQ7 3312 aa16.47■□□□□ 0.23
NME1-208ENST00000487481 HAPLN1P10915 354 aaPredicted RBP16.46■□□□□ 0.23
NME1-208ENST00000487481 MATR3P43243 847 aaKnown RBP eCLIP16.46■□□□□ 0.23
NME1-208ENST00000487481 IFNAR2P48551 515 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 FAM160A1Q05DH4 1040 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 USP4Q13107 963 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 ZNF77Q15935 545 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 KYAT1Q16773 422 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 ZNF423Q2M1K9 1284 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 SPATA1Q5VX52 437 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 LMBRD2Q68DH5 695 aaPredicted RBP16.46■□□□□ 0.23
NME1-208ENST00000487481 SLC23A3Q6PIS1 610 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 HDDC3Q8N4P3 179 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 TMEM161BQ8NDZ6 487 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 OLIG1Q8TAK6 271 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 TIPINQ9BVW5 301 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 MMP17Q9ULZ9 603 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 DNM3Q9UQ16 869 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 SCN1AP35498 2009 aa16.46■□□□□ 0.23
NME1-208ENST00000487481 TCHHQ07283 1943 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 APC2O95996 2303 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 HELZ2Q9BYK8 2649 aaKnown RBP16.45■□□□□ 0.22
NME1-208ENST00000487481 LACTBL1A8MY62 500 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 ALDH1A2O94788 518 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
NME1-208ENST00000487481 HOXD12P35452 270 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 P2RY2P41231 377 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 FOSBP53539 338 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 NR1H3Q13133 447 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 ZNF174Q15697 407 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 CRY1Q16526 586 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 EML3Q32P44 896 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 SPDYCQ5MJ68 293 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 RINT1Q6NUQ1 792 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 C19orf48Q6RUI8 117 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 RAB44Q7Z6P3 723 aaPredicted RBP16.45■□□□□ 0.22
NME1-208ENST00000487481 CHCHD4Q8N4Q1 142 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 SNX29Q8TEQ0 813 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 HAPLN2Q9GZV7 340 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 TMEM206Q9H813 350 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 ABI2Q9NYB9 513 aaPredicted RBP16.45■□□□□ 0.22
NME1-208ENST00000487481 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 WNT6Q9Y6F9 365 aa16.45■□□□□ 0.22
NME1-208ENST00000487481 ASH1LQ9NR48 2969 aaKnown RBP16.45■□□□□ 0.22
NME1-208ENST00000487481 CSH1P0DML2 217 aa16.44■□□□□ 0.22
NME1-208ENST00000487481 CSH2P0DML3 217 aa16.44■□□□□ 0.22
NME1-208ENST00000487481 TNFSF9P41273 254 aa16.44■□□□□ 0.22
NME1-208ENST00000487481 CDR1P51861 262 aa16.44■□□□□ 0.22
NME1-208ENST00000487481 SMTNP53814 917 aa16.44■□□□□ 0.22
NME1-208ENST00000487481 ATXN3P54252 364 aaPredicted RBP16.44■□□□□ 0.22
NME1-208ENST00000487481 HNRNPDQ14103 355 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms