RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ZNF333Q96JL9 665 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 STRA6Q9BX79 667 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 RAB6CQ9H0N0 254 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 IRAK4Q9NWZ3 460 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 PSMC3IPQ9P2W1 217 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 STOML1Q9UBI4 398 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 LRRIQ4A6NIV6 560 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 ZMPSTE24O75844 475 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 HSPA1LP34931 641 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 LIG4P49917 911 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 RBBP5Q15291 538 aaKnown RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 TKFCQ3LXA3 575 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 AGR3Q8TD06 166 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 GMCL1Q96IK5 515 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 SCOCQ9UIL1 159 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 FCHO1O14526 889 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 TYROBPO43914 113 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 ECE2O60344 883 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 GRAP2O75791 330 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 TMEM63AO94886 807 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 UBAP2LQ14157 1087 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 CDO1Q16878 200 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 CCDC62Q6P9F0 684 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 IZUMO2Q6UXV1 221 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 PYDC1Q8WXC3 89 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 PPP1R36Q96LQ0 422 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 WDR83Q9BRX9 315 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 BTBD10Q9BSF8 475 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 DCLRE1BQ9H816 532 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 EURLQ9NYK6 297 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 NUB1Q9Y5A7 615 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 DHX15O43143 795 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 PEX10O60683 326 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 MTA2O94776 668 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 RFX1P22670 979 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 VHLP40337 213 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 PARP6Q2NL67 630 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 KBTBD12Q3ZCT8 623 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 TREML1Q86YW5 311 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 SLITRK1Q96PX8 696 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 MAGED2Q9UNF1 606 aaPredicted RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 MRPL11Q9Y3B7 192 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 PCDHB2Q9Y5E7 798 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 ATP2A1O14983 1001 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 CSDE1O75534 798 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 PDE5AO76074 875 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 PSMG1O95456 288 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 GTF2BQ00403 316 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 MMRN1Q13201 1228 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 PRAMEF18Q5VWM3 479 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 TTLL6Q8N841 843 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 MORC4Q8TE76 937 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 NSL1Q96IY1 281 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 FGD4Q96M96 766 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 SLC17A6Q9P2U8 582 aa13□□□□□ -0.33
HSPG2-211ENST00000486901 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
HSPG2-211ENST00000486901 LOC100653049A0A140TA62 436 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 CCDC22O60826 627 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 KRT34O76011 436 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 GPC3P51654 580 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 GEMIN4P57678 1058 aaKnown RBP12.99□□□□□ -0.33
HSPG2-211ENST00000486901 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 SPOCD1Q6ZMY3 1216 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 MON1BQ7L1V2 547 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 ZDHHC15Q96MV8 337 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 GBP5Q96PP8 586 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 IQCGQ9H095 443 aaKnown RBP12.99□□□□□ -0.33
HSPG2-211ENST00000486901 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 RABGEF1Q9UJ41 708 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 ATRNL1Q5VV63 1379 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 ZNF541Q9H0D2 1346 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 H0YIN7 160 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-211ENST00000486901 ELK3P41970 407 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 RAB27AP51159 221 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 TMPRSS15P98073 1019 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 ZNF252P-AS1Q0IIN9 211 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 PTK7Q13308 1070 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 RASA2Q15283 850 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 BSPRYQ5W0U4 402 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 TATDN1Q6P1N9 297 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 DNAJC24Q6P3W2 148 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 RSPH3Q86UC2 560 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 PPFIBP2Q8ND30 876 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 ZNF341Q9BYN7 854 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 AK5Q9Y6K8 562 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms