RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 CROCCP3Q8IVE0 287 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 SHCBP1Q8NEM2 672 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 KIFC1Q9BW19 673 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 SNX13Q9Y5W8 968 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 LOC100653049A0A140TA62 436 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 BTN3A3O00478 584 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 CNOT3O75175 753 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 KRT34O76011 436 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 FEN1P39748 380 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 PKN2Q16513 984 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 ZSWIM7Q19AV6 140 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 FASTKD5Q7L8L6 764 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 NALCNQ8IZF0 1738 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 SLC16A4O15374 487 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 LCA5LO95447 670 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 HSMCR30P0CW71 290 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 CYP19A1P11511 503 aaPredicted RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 NNMTP40261 264 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 CSE1LP55060 971 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 GEMIN4P57678 1058 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 RPS7P62081 194 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 ZNF618Q5T7W0 954 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 POTEEQ6S8J3 1075 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 MRPL48Q96GC5 212 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 PLEKHA5Q9HAU0 1116 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 CHD2O14647 1828 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 NFAT5O94916 1531 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 PVALEFA0A1B0GWK0 134 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 TPD52L2O43399 206 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 PLEKHA8P1O95397 391 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 SPRP35270 261 aaPredicted RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 SERPINH1P50454 418 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 DGUOKQ16854 277 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 CYP4A22Q5TCH4 519 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 BNC2Q6ZN30 1099 aaPredicted RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 RDM1Q8NG50 284 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 CEP44Q9C0F1 390 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 ISCUQ9H1K1 167 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 RBM12Q9NTZ6 932 aaKnown RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 STON1Q9Y6Q2 735 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 AHCYL1O43865 530 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 GDF11O95390 407 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 THRAP10827 490 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 KRT20P35900 424 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 TPI1P60174 286 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 UGP2Q16851 508 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 ZNF568Q3ZCX4 644 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 DGKKQ5KSL6 1271 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 SNX30Q5VWJ9 437 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 GLYCTKQ8IVS8 523 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 FOPNLQ96NB1 174 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 ZSWIM5Q9P217 1185 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 HEY2Q9UBP5 337 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 RABGEF1Q9UJ41 708 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 RWDD3Q9Y3V2 267 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
GABRE-209ENST00000486255 SPATA31A6Q5VVP1 1343 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 PALLDQ8WX93 1383 aa9.12□□□□□ -0.95
GABRE-209ENST00000486255 C3orf70A6NLC5 250 aaPredicted RBP9.11□□□□□ -0.95
GABRE-209ENST00000486255 SPAG6O75602 509 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 CCNA1P78396 465 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 ALFQ53S48 1182 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 C3orf62Q6ZUJ4 267 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 NEK10Q6ZWH5 1172 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 KRT74Q7RTS7 529 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 SUGP1Q8IWZ8 645 aaKnown RBP9.11□□□□□ -0.95
GABRE-209ENST00000486255 KRT78Q8N1N4 520 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 KCTD17Q8N5Z5 321 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 ARL10Q8N8L6 244 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 SLC10A4Q96EP9 437 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 UBE2OQ9C0C9 1292 aaKnown RBP9.11□□□□□ -0.95
GABRE-209ENST00000486255 ATP6V1HQ9UI12 483 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 GTF2A1LQ9UNN4 478 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 MEGF6O75095 1541 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 CYP2D7A0A087X1C5 515 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 MED26O95402 600 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 MOCS2O96007 188 aaPredicted RBP9.11□□□□□ -0.95
GABRE-209ENST00000486255 IGKV5-2P06315 115 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 AKR1B1P15121 316 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 ITGA8P53708 1063 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 STX5Q13190 355 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 SYTL1Q8IYJ3 562 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 SERPINB12Q96P63 405 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 UBXN6Q9BZV1 441 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 DCLRE1BQ9H816 532 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 DDX18Q9NVP1 670 aaKnown RBP9.11□□□□□ -0.95
GABRE-209ENST00000486255 TUBGCP4Q9UGJ1 667 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 PCDHA6Q9UN73 950 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 PCDHA8Q9Y5H6 950 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 E9PBE3 544 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 NDUFS3O75489 264 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 TFE3P19532 575 aaPredicted RBP9.11□□□□□ -0.95
GABRE-209ENST00000486255 PSMB9P28065 219 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 SGO1Q5FBB7 561 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
GABRE-209ENST00000486255 ZCCHC7Q8N3Z6 543 aaKnown RBP9.11□□□□□ -0.95
GABRE-209ENST00000486255 SVOPQ8N4V2 548 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms