RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TIMMDC1Q9NPL8 285 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 SPG21Q9NZD8 308 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 LIMA1Q9UHB6 759 aaKnown RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 SIX4Q9UIU6 781 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 ITGA11Q9UKX5 1188 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 POLIQ9UNA4 740 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 DERAQ9Y315 318 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 C2CD2Q9Y426 696 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 TIMM13Q9Y5L4 95 aaPredicted RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 SNX9Q9Y5X1 595 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 CYB561D2O14569 222 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 INPPL1O15357 1258 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 N4BP1O75113 896 aaKnown RBP6.04□□□□□ -1.44
COPS3-208ENST00000486032 FGF18O76093 207 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 VNN1O95497 513 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 ZNF18P17022 549 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 SLC9A1P19634 815 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 CYP3A5P20815 502 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 LRPAP1P30533 357 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 RPL9P32969 192 aaKnown RBP6.04□□□□□ -1.44
COPS3-208ENST00000486032 BMPR1AP36894 532 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 RAP1GAPP47736 663 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 TAF6P49848 677 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 KLK7P49862 253 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 AP3M2P53677 418 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 ARPP19P56211 112 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 UBASH3AP57075 661 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 TNNC1P63316 161 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 SMAD3P84022 425 aaKnown RBP6.04□□□□□ -1.44
COPS3-208ENST00000486032 TAP1Q03518 808 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 UBXN1Q04323 297 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 KRT17Q04695 432 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 DSC1Q08554 894 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 MYO1EQ12965 1108 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 GPM6BQ13491 265 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 UPP1Q16831 310 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 ZNF699Q32M78 642 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 ZACNQ401N2 412 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 SV2CQ496J9 727 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 EPC2Q52LR7 807 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 TIGD5Q53EQ6 642 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 ZNF667Q5HYK9 610 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 MIIPQ5JXC2 388 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 KIAA1841Q6NSI8 718 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 FUT10Q6P4F1 479 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 DCLRE1AQ6PJP8 1040 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 GBP6Q6ZN66 633 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 CHSY3Q70JA7 882 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 TAS1R1Q7RTX1 841 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 NT5DC4Q86YG4 428 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 RNF135Q8IUD6 432 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 GLYCTKQ8IVS8 523 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 SLC39A11Q8N1S5 342 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 CCDC150Q8NCX0 1101 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 C3orf58Q8NDZ4 430 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 FBXL13Q8NEE6 735 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 MICAL1Q8TDZ2 1067 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 TMEM174Q8WUU8 243 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 BCL7CQ8WUZ0 217 aaPredicted RBP6.04□□□□□ -1.44
COPS3-208ENST00000486032 POF1BQ8WVV4 589 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 AUTS2Q8WXX7 1259 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 SEMA4DQ92854 862 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 TRIM11Q96F44 468 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 HPDLQ96IR7 371 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 B3GALT6Q96L58 329 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 ZNF560Q96MR9 790 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 UROC1Q96N76 676 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 CDX2Q99626 313 aaPredicted RBP6.04□□□□□ -1.44
COPS3-208ENST00000486032 TMEM175Q9BSA9 504 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 LSM14BQ9BX40 385 aaKnown RBP6.04□□□□□ -1.44
COPS3-208ENST00000486032 IMPG2Q9BZV3 1241 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 HSD3B7Q9H2F3 369 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 MARCH5Q9NX47 278 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 RAB20Q9NX57 234 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 IFNKQ9P0W0 207 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 GCNT4Q9P109 453 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 ADAM28Q9UKQ2 775 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 PDCD11Q14690 1871 aaKnown RBP6.04□□□□□ -1.44
COPS3-208ENST00000486032 PRUNE2Q8WUY3 3088 aa6.04□□□□□ -1.44
COPS3-208ENST00000486032 SCN1AP35498 2009 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 NLRC5Q86WI3 1866 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PLXNA4Q9HCM2 1894 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 ANO9A1A5B4 782 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 KPNA7A9QM74 516 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 MEN1O00255 615 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PIRO00625 290 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 GRM6O15303 877 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 TEX33O43247 280 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 LPXNO60711 386 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 HUS1O60921 280 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 THBS1P07996 1170 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 H2AFB1P0C5Y9 115 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 CD58P19256 250 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 TKTP29401 623 aaKnown RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 GTF2H1P32780 548 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PPM1AP35813 382 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 USP8P40818 1118 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PNPLA4P41247 253 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 CDH8P55286 799 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms