RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TOB2Q14106 344 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SCARB2Q14108 478 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 BECN1Q14457 450 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 TARBP2Q15633 366 aaKnown RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 NPY5RQ15761 445 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 TMEM184AQ6ZMB5 413 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SEPT14Q6ZU15 432 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 COLGALT2Q8IYK4 626 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 MNS1Q8NEH6 495 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SEPT8Q92599 483 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 FAM193BQ96PV7 902 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 TRPV4Q9HBA0 871 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 PRDM5Q9NQX1 630 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 C14orf119Q9NWQ9 140 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 EPS15L1Q9UBC2 864 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SLC9A2Q9UBY0 812 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 INSL6Q9Y581 213 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 MTCH2Q9Y6C9 303 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 TET1Q8NFU7 2136 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 PLOD2O00469 737 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 PFKFB2O60825 505 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 AMHP03971 560 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 GCFC2P16383 781 aaKnown RBP5.7□□□□□ -1.5
CCDC39-205ENST00000485055 GRIA2P42262 883 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 MXI1P50539 228 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 MAPK10P53779 464 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 GDF10P55107 478 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 LRRC74AQ0VAA2 488 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 SEMA5AQ13591 1074 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 LONRF2Q1L5Z9 754 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF618Q5T7W0 954 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 RAPH1Q70E73 1250 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 BHMTQ93088 406 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 TMEM237Q96Q45 408 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 ANO3Q9BYT9 981 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 CPVLQ9H3G5 476 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 C6orf50Q9HD87 102 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 HAUS2Q9NVX0 235 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 CORO2BQ9UQ03 480 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 PDCD11Q14690 1871 aaKnown RBP5.7□□□□□ -1.5
CCDC39-205ENST00000485055 PGPEP1LA6NFU8 196 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 C19orf67A6NJJ6 358 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 RSPH10B2B2RC85 870 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 KIF28PB7ZC32 967 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 H3BNC9 293 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 MAGEB2O15479 319 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 MAFKO60675 156 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 BAG2O95816 211 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 CFHP08603 1231 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 RSPH10BP0C881 870 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 CLCN2P51788 898 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 ANKRD1Q15327 319 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 AAK1Q2M2I8 961 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 TCTN1Q2MV58 587 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 ADCK5Q3MIX3 580 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 LEXMQ3ZCV2 418 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 TJAP1Q5JTD0 557 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 FBXO47Q5MNV8 452 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 RSPH3Q86UC2 560 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 TREML1Q86YW5 311 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC39-205ENST00000485055 DRAXINQ8NBI3 349 aaPredicted RBP5.7□□□□□ -1.5
CCDC39-205ENST00000485055 GOT1L1Q8NHS2 421 aaPredicted RBP5.7□□□□□ -1.5
CCDC39-205ENST00000485055 ATP8B4Q8TF62 1192 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 TNFRSF25Q93038 417 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 MYO19Q96H55 970 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 SCLYQ96I15 445 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 YME1L1Q96TA2 773 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 NCAPGQ9BPX3 1015 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 SLC39A3Q9BRY0 314 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 RNPEPQ9H4A4 650 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 MLXIPQ9HAP2 919 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 KCNH7Q9NS40 1196 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 PPP4R2Q9NY27 417 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 NDOR1Q9UHB4 597 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 CEP83Q9Y592 693 aa5.7□□□□□ -1.5
CCDC39-205ENST00000485055 SPDYE3A6NKU9 549 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 TLL1O43897 1013 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 GAS2O43903 313 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 SUSD5O60279 629 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 USO1O60763 962 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 MAFO75444 373 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PSMD10O75832 226 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 DEXIO95424 95 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ZBED1O96006 694 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 CHRNA1P02708 482 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 THEGLP0DJG4 465 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 XRCC6P12956 609 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 HNF4AP41235 474 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 JAK3P52333 1124 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PMS1P54277 932 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 YBEYP58557 167 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 MRPS6P82932 125 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ANKRD39Q53RE8 183 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 FAM160B1Q5W0V3 765 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 RPUSD3Q6P087 351 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 BLOC1S2Q6QNY1 142 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ABRAXAS1Q6UWZ7 409 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 CYP2U1Q7Z449 544 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PPFIBP1Q86W92 1011 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms