RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 PAK1Q13153 545 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 CCDC142Q17RM4 750 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 CCDC40Q4G0X9 1142 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 TMEM31Q5JXX7 168 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 LIMS2Q7Z4I7 341 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 LEMD2Q8NC56 503 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 ST13P5Q8NFI4 369 aaPredicted RBP20.46■□□□□ 0.87
SNX17-206ENST00000484886 RSAD2Q8WXG1 361 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 TAF4BQ92750 862 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 TCEAL4Q96EI5 215 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 MCRS1Q96EZ8 462 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 LPIN3Q9BQK8 851 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 NUP62CLQ9H1M0 184 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 TMEM8AQ9HCN3 771 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 LMBRD1Q9NUN5 540 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 IGSF9Q9P2J2 1179 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 ARMCX3Q9UH62 379 aaPredicted RBP20.46■□□□□ 0.87
SNX17-206ENST00000484886 ASB3Q9Y575 518 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 MYO10Q9HD67 2058 aa20.46■□□□□ 0.87
SNX17-206ENST00000484886 NOTCH4Q99466 2003 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 MYBPHLA2RUH7 354 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 A8MXQ7 604 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 GTF2H1P32780 548 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 MXI1P50539 228 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 CYP27A1Q02318 531 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 MAPRE1Q15691 268 aaKnown RBP20.45■□□□□ 0.86
SNX17-206ENST00000484886 KRT39Q6A163 491 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 C4orf50Q6ZRC1 276 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 NPAS3Q8IXF0 933 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 GPR152Q8TDT2 470 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 TAS1R2Q8TE23 839 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 GIPC2Q8TF65 315 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 DNAJC25Q9H1X3 360 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 VRTNQ9H8Y1 702 aa20.45■□□□□ 0.86
SNX17-206ENST00000484886 AVENQ9NQS1 362 aaPredicted RBP20.45■□□□□ 0.86
SNX17-206ENST00000484886 ATF6P18850 670 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 CYP2F1P24903 491 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 CDH8P55286 799 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 TDGQ13569 410 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 MDH1BQ5I0G3 518 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 PRSS36Q5K4E3 855 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 SPOPLQ6IQ16 392 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 DNAJB7Q7Z6W7 309 aaPredicted RBP20.44■□□□□ 0.86
SNX17-206ENST00000484886 SCN4BQ8IWT1 228 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 ZC3H3Q8IXZ2 948 aaKnown RBP20.44■□□□□ 0.86
SNX17-206ENST00000484886 UBALD2Q8IYN6 164 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 PSMG2Q969U7 264 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 MYLPFQ96A32 169 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 CEP63Q96MT8 703 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 SMOC2Q9H3U7 446 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 SLITRK6Q9H5Y7 841 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 ABCB6Q9NP58 842 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 CRTAC1Q9NQ79 661 aa20.44■□□□□ 0.86
SNX17-206ENST00000484886 MAGEC2Q9UBF1 373 aaPredicted RBP20.44■□□□□ 0.86
SNX17-206ENST00000484886 ASS1P00966 412 aaKnown RBP20.43■□□□□ 0.86
SNX17-206ENST00000484886 FAM163BP0C2L3 166 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 GJA1P17302 382 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 CCR2P41597 374 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 GPR15P49685 360 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 RPL10AP62906 217 aaKnown RBP20.43■□□□□ 0.86
SNX17-206ENST00000484886 NOP14P78316 857 aaKnown RBP20.43■□□□□ 0.86
SNX17-206ENST00000484886 TTI2Q6NXR4 508 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 TRIM67Q6ZTA4 783 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 MTSS1LQ765P7 747 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 NXPE3Q969Y0 559 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 GCNAQ96QF7 691 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 PKMYT1Q99640 499 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 DUSP9Q99956 384 aaKnown RBP20.43■□□□□ 0.86
SNX17-206ENST00000484886 DPEP3Q9H4B8 488 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 METTL14Q9HCE5 456 aaKnown RBP20.43■□□□□ 0.86
SNX17-206ENST00000484886 GDE1Q9NZC3 331 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 NUMBLQ9Y6R0 609 aa20.43■□□□□ 0.86
SNX17-206ENST00000484886 A0A1W2PRU2 124 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 FGF19O95750 216 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 PTPN1P18031 435 aaKnown RBP20.42■□□□□ 0.86
SNX17-206ENST00000484886 EPHA5P54756 1037 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 SIGLEC14Q08ET2 396 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 HTR4Q13639 388 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 DDR2Q16832 855 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 SDHAF4Q5VUM1 108 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 FAM171BQ6P995 826 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 FILIP1Q7Z7B0 1213 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 FBXL13Q8NEE6 735 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 FUBP3Q96I24 572 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNX17-206ENST00000484886 KXD1Q9BQD3 176 aa20.42■□□□□ 0.86
SNX17-206ENST00000484886 ZNF334Q9HCZ1 680 aaPredicted RBP20.42■□□□□ 0.86
SNX17-206ENST00000484886 MAGED2Q9UNF1 606 aaPredicted RBP20.42■□□□□ 0.86
SNX17-206ENST00000484886 TMEM221A6NGB7 291 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 M0R296 226 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 GPR37L1O60883 481 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 BDNFP23560 247 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 GABRR2P28476 465 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 TEAD2Q15562 447 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 CFAP221Q4G0U5 840 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 WDR44Q5JSH3 913 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 PARM1Q6UWI2 310 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 TMC8Q8IU68 726 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 B3GALNT2Q8NCR0 500 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 STKLD1Q8NE28 680 aa20.41■□□□□ 0.86
SNX17-206ENST00000484886 SHKBP1Q8TBC3 707 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms