RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TCEAL3Q969E4 200 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 CDK5RAP3Q96JB5 506 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 PYM1Q9BRP8 204 aaKnown RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 TDP1Q9NUW8 608 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 ABI2Q9NYB9 513 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 KCND2Q9NZV8 630 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 ZMYM5Q9UJ78 669 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 METRNQ9UJH8 293 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 CPSF3Q9UKF6 684 aaKnown RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 DSEQ9UL01 958 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 MAGED2Q9UNF1 606 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 INVSQ9Y283 1065 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 CNOT1A5YKK6 2376 aaKnown RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 USP24Q9UPU5 2620 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 TRIP11Q15643 1979 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 VWA3AA6NCI4 1184 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 ANKRD63C9JTQ0 380 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 K7ENM7 598 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 GIPC1O14908 333 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 FAM13AO94988 1023 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 SEC24BO95487 1268 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 CAVIN2O95810 425 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 PIGRP01833 764 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 PROS1P07225 676 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 DRD1P21728 446 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 DDX6P26196 483 aaKnown RBP eCLIP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 GJA4P35212 333 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 GPR15P49685 360 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 TAF6P49848 677 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 NOVA1P51513 510 aaKnown RBP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 ATP2C1P98194 919 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 CREB5Q02930 508 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 PSMD2Q13200 908 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 PDGFRLQ15198 375 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 ELF2Q15723 593 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 FBXO43Q4G163 708 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 TMEM119Q4V9L6 283 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 SDHAF4Q5VUM1 108 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 MCTP1Q6DN14 999 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 SLC39A4Q6P5W5 647 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 MON1AQ86VX9 555 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 GPBP1Q86WP2 473 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 DCP1BQ8IZD4 617 aaKnown RBP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 STKLD1Q8NE28 680 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 TTC16Q8NEE8 873 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 RPLP0P6Q8NHW5 317 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 RIN3Q8TB24 985 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 SPPL2BQ8TCT7 592 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 C2orf15Q8WU43 125 aaKnown RBP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 MRPS31Q92665 395 aaKnown RBP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 KCNN1Q92952 543 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 ZSCAN31Q96LW9 406 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 P2RY13Q9BPV8 354 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 REEP2Q9BRK0 252 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 PI4K2AQ9BTU6 479 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 DUSP15Q9H1R2 295 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-206ENST00000483030 ZHX3Q9H4I2 956 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 TMLHEQ9NVH6 421 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 DPP3Q9NY33 737 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 DERAQ9Y315 318 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 PCDHB5Q9Y5E4 795 aa7.97□□□□□ -1.13
CSDE1-206ENST00000483030 CHD6Q8TD26 2715 aa7.96□□□□□ -1.13
CSDE1-206ENST00000483030 BCLAF3A2AJT9 711 aaKnown RBP7.96□□□□□ -1.14
CSDE1-206ENST00000483030 KPNA7A9QM74 516 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 C1QTNF9BB2RNN3 333 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 TISP43B9A030 160 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 TRAK2O60296 914 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 PRPF40AO75400 957 aaKnown RBP7.96□□□□□ -1.14
CSDE1-206ENST00000483030 RHOBTB1O94844 696 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 APBB3O95704 486 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 KRT18P05783 430 aaKnown RBP7.96□□□□□ -1.14
CSDE1-206ENST00000483030 C1QTNF9P0C862 333 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 CSH1P0DML2 217 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 CSH2P0DML3 217 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 SCP2P22307 547 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 GBP1P32455 592 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 SMARCB1Q12824 385 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 DMC1Q14565 340 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 DDR2Q16832 855 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 ADALQ6DHV7 355 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 SYT13Q7L8C5 426 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-206ENST00000483030 CD101Q93033 1021 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 CYP2S1Q96SQ9 504 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 EDEM2Q9BV94 578 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 ASB7Q9H672 318 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 ECT2Q9H8V3 914 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 KIF9Q9HAQ2 790 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 PARVGQ9HBI0 331 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 SH2B1Q9NRF2 756 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-206ENST00000483030 DUS2Q9NX74 493 aaKnown RBP7.96□□□□□ -1.14
CSDE1-206ENST00000483030 EBF1Q9UH73 591 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 ODF2LQ9ULJ1 636 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 C2CD2Q9Y426 696 aa7.96□□□□□ -1.14
CSDE1-206ENST00000483030 CFAP47Q6ZTR5 3102 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 KHNYNO15037 678 aaKnown RBP7.95□□□□□ -1.14
CSDE1-206ENST00000483030 SPINK2P20155 84 aa7.95□□□□□ -1.14
CSDE1-206ENST00000483030 CYP2F1P24903 491 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms