RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TTC30AQ86WT1 665 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 DAW1Q8N136 415 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 MDGA1Q8NFP4 955 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 USP33Q8TEY7 942 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 ATP2A3Q93084 1043 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 SPACA7Q96KW9 195 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 SENP8Q96LD8 212 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 DRC1Q96MC2 740 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 DUS2Q9NX74 493 aaKnown RBP16.2■□□□□ 0.18
HDAC6-224ENST00000481929 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-224ENST00000481929 LAMA5O15230 3695 aa16.2■□□□□ 0.18
HDAC6-224ENST00000481929 MYO16Q9Y6X6 1858 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 TTC26A0AVF1 554 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 SLC16A4O15374 487 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 MAP3K13O43283 966 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 ALDH1A2O94788 518 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 ZIC2O95409 532 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-224ENST00000481929 F11P03951 625 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 CLTAP09496 248 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 OR52Z1P0C646 297 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 MATR3P43243 847 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDAC6-224ENST00000481929 GUCY2FP51841 1108 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 CDR1P51861 262 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 SEC13P55735 322 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 MCL1Q07820 350 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 NR1H3Q13133 447 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 ZBTB6Q15916 424 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 ECM1Q16610 540 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 C2orf27AQ580R0 203 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 LMBRD2Q68DH5 695 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-224ENST00000481929 SLC23A3Q6PIS1 610 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 RAB44Q7Z6P3 723 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-224ENST00000481929 MON1AQ86VX9 555 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 TTC16Q8NEE8 873 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 SPPL2BQ8TCT7 592 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
HDAC6-224ENST00000481929 OSCP1Q8WVF1 389 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 ZCWPW1Q9H0M4 648 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 MMP17Q9ULZ9 603 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 KIAA1024Q9UPX6 916 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 PI4KAP42356 2102 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 LOC400499M0QZD8 3231 aa16.19■□□□□ 0.18
HDAC6-224ENST00000481929 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 PPEF2O14830 753 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 CLDN3O15551 220 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 CFIP05156 583 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 FDPSP14324 419 aaKnown RBP16.18■□□□□ 0.18
HDAC6-224ENST00000481929 PAX3P23760 479 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 P2RY2P41231 377 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 PTGER3P43115 390 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 LILRA4P59901 499 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 SMARCB1Q12824 385 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 HNRNPDQ14103 355 aaKnown RBP16.18■□□□□ 0.18
HDAC6-224ENST00000481929 TRIM29Q14134 588 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 LYSMD4Q5XG99 296 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 TMEFF1Q8IYR6 380 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 OLIG1Q8TAK6 271 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 GTPBP2Q9BX10 602 aaKnown RBP16.18■□□□□ 0.18
HDAC6-224ENST00000481929 C17orf75Q9HAS0 396 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 TMEM74BQ9NUR3 256 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
HDAC6-224ENST00000481929 ABI2Q9NYB9 513 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-224ENST00000481929 WNT6Q9Y6F9 365 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 APC2O95996 2303 aa16.18■□□□□ 0.18
HDAC6-224ENST00000481929 ATXN2Q99700 1313 aaKnown RBP16.18■□□□□ 0.18
HDAC6-224ENST00000481929 DENND4CQ5VZ89 1909 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 OPHN1O60890 802 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 CYP11A1P05108 521 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 HAPLN1P10915 354 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-224ENST00000481929 HMGA1P17096 107 aaKnown RBP16.17■□□□□ 0.18
HDAC6-224ENST00000481929 FOSBP53539 338 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 FAM193AP78312 1265 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 FAM160A1Q05DH4 1040 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 ZNF77Q15935 545 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 CRY1Q16526 586 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 EML3Q32P44 896 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 ZPBP2Q6X784 338 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 METTL23Q86XA0 190 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 CCDC33Q8N5R6 958 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 WHAMMQ8TF30 809 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 RLN3Q8WXF3 142 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 FNBP1Q96RU3 617 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 CCDC86Q9H6F5 360 aaKnown RBP16.17■□□□□ 0.18
HDAC6-224ENST00000481929 MBD1Q9UIS9 605 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-224ENST00000481929 DSEQ9UL01 958 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 MAGED2Q9UNF1 606 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-224ENST00000481929 TSC2P49815 1807 aa16.17■□□□□ 0.18
HDAC6-224ENST00000481929 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 CSH1P0DML2 217 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 CSH2P0DML3 217 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 HOXD12P35452 270 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 GFPT1Q06210 699 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-224ENST00000481929 USP4Q13107 963 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 MAPK7Q13164 816 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 SPDYCQ5MJ68 293 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 THEM5Q8N1Q8 247 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 TSPAN18Q96SJ8 248 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 TMEM206Q9H813 350 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 TRPC7Q9HCX4 862 aa16.16■□□□□ 0.18
HDAC6-224ENST00000481929 SLC6A14Q9UN76 642 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms