RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 TMEM105Q8N8V8 129 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 SEMA4DQ92854 862 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 SMARCE1Q969G3 411 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 MYLPFQ96A32 169 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 ZNF512Q96ME7 567 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 TIGD1Q96MW7 591 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 SYT15Q9BQS2 421 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 ACBD6Q9BR61 282 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 SMG9Q9H0W8 520 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 ASAH2Q9NR71 780 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 IGSF9Q9P2J2 1179 aa12.22□□□□□ -0.45
RAPGEF1-207ENST00000481260 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 CLDN5O00501 218 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 PHACTR2O75167 634 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 PRPF40AO75400 957 aaKnown RBP12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 HLA-DRAP01903 254 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 PAX3P23760 479 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 ALDH1A3P47895 512 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 VAMP7P51809 220 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 EPHB3P54753 998 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 TSPY1Q01534 308 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 MYO1EQ12965 1108 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 ADAM9Q13443 819 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 TRPC3Q13507 836 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 CAMK4Q16566 473 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 NFIL3Q16649 462 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 ZACNQ401N2 412 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 MDH1BQ5I0G3 518 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 UBALD2Q8IYN6 164 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 ADSSL1Q8N142 457 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 SIX5Q8N196 739 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 TMEM86AQ8N2M4 240 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 FBXL6Q8N531 539 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 FAM200AQ8TCP9 573 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 PSMG2Q969U7 264 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 CCDC47Q96A33 483 aaKnown RBP12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 MAFFQ9ULX9 164 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 PCDHB5Q9Y5E4 795 aa12.21□□□□□ -0.45
RAPGEF1-207ENST00000481260 SHISA7A6NL88 538 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 TADA3O75528 432 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 PRAMEF12O95522 483 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 BDNFP23560 247 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 GABRR2P28476 465 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 GNL1P36915 607 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 USP46P62068 366 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 MYL7Q01449 175 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 ZNF699Q32M78 642 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 CYP4A22Q5TCH4 519 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 IQCEQ6IPM2 695 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 VITQ6UXI7 678 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 BMP8AQ7Z5Y6 402 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 ZC3H3Q8IXZ2 948 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 DCP1BQ8IZD4 617 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 ELMOD1Q8N336 334 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 PRSS33Q8NF86 280 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 FLCNQ8NFG4 579 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 RIN3Q8TB24 985 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 ZSCAN18Q8TBC5 510 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 ASB16Q96NS5 453 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 GSDMAQ96QA5 445 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 TWNKQ96RR1 684 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 B3GNT5Q9BYG0 378 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 ZNF518BQ9C0D4 1074 aa12.2□□□□□ -0.46
RAPGEF1-207ENST00000481260 USP34Q70CQ2 3546 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 KMT2EQ8IZD2 1858 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 SLC38A8A6NNN8 435 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 KINO60870 393 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 CLSTN1O94985 981 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 SMC2O95347 1197 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 SRFP11831 508 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 CD72P21854 359 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 ASPAP45381 313 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 LHX1P48742 406 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 STX17P56962 302 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 TNNC1P63316 161 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 CYP27A1Q02318 531 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 MORC3Q14149 939 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 KLHL10Q6JEL2 608 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 SCN4BQ8IWT1 228 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 SPPL2BQ8TCT7 592 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 PCED1BQ96HM7 432 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 MED15Q96RN5 788 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 FOXQ1Q9C009 403 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 GDE1Q9NZC3 331 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 FBXL21Q9UKT6 434 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 MAGED2Q9UNF1 606 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 CTNND2Q9UQB3 1225 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 FRMD4BQ9Y2L6 1034 aa12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-207ENST00000481260 TACC1O75410 805 aa12.18□□□□□ -0.46
RAPGEF1-207ENST00000481260 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms