RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	MMS22L	Q6ZRQ5	1243 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	PHF13	Q86YI8	300 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-223	ENST00000479656	TMEM86A	Q8N2M4	240 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	RFFL	Q8WZ73	363 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	TOP1MT	Q969P6	601 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	TNIP3	Q96KP6	325 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	SUSD3	Q96L08	255 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	PRKAG2	Q9UGJ0	569 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	CYTH4	Q9UIA0	394 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	NCAN	O14594	1321 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	GRID2IP	A4D2P6	1211 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	CTAGE9	A4FU28	777 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	NT5C1B-RDH14	C9J2C7	533 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	URI1	O94763	535 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-223	ENST00000479656	CYP1A2	P05177	515 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	CCDC130	P13994	396 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	PTPN1	P18031	435 aa	Known RBP	11.89	□□□□□ -0.51
APTX-223	ENST00000479656	MMP8	P22894	467 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	RRM1	P23921	792 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	GPD2	P43304	727 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	DEFB103A	P81534	67 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	IFI16	Q16666	785 aa	Known RBP	11.89	□□□□□ -0.51
APTX-223	ENST00000479656	CCDC142	Q17RM4	750 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	GOLGA7B	Q2TAP0	167 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-223	ENST00000479656	C16orf59	Q7L2K0	433 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	OTOP2	Q7RTS6	562 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	ERICH1	Q86X53	443 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	METTL23	Q86XA0	190 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	RHOT2	Q8IXI1	618 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	TPCN2	Q8NHX9	752 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	BAD	Q92934	168 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	VCPIP1	Q96JH7	1222 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	ALS2CR12	Q96Q35	445 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	NAPG	Q99747	312 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-223	ENST00000479656	MRPL9	Q9BYD2	267 aa	Known RBP	11.89	□□□□□ -0.51
APTX-223	ENST00000479656	DNAI2	Q9GZS0	605 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	IL23A	Q9NPF7	189 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	GTF3C4	Q9UKN8	822 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	FAN1	Q9Y2M0	1017 aa		11.89	□□□□□ -0.51
APTX-223	ENST00000479656	TMEM189-UBE2V1	I3L0A0	370 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	AMH	P03971	560 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	ATP1A1	P05023	1023 aa	Known RBP	11.88	□□□□□ -0.51
APTX-223	ENST00000479656	CYP11A1	P05108	521 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	GALT	P07902	379 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	PFKM	P08237	780 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	MYBL1	P10243	752 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	ADORA2B	P29275	332 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	PBX3	P40426	434 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	SLC11A1	P49279	550 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	C1QBP	Q07021	282 aa	Known RBP	11.88	□□□□□ -0.51
APTX-223	ENST00000479656	STIL	Q15468	1287 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	ARHGAP17	Q68EM7	881 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	PPP1R2P3	Q6NXS1	205 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	TTC30A	Q86WT1	665 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	C7orf61	Q8IZ16	206 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	B3GALNT2	Q8NCR0	500 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	TRIM11	Q96F44	468 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	NUP85	Q9BW27	656 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	COLEC11	Q9BWP8	271 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	GOLPH3	Q9H4A6	298 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	HESX1	Q9UBX0	185 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	PCDHGC5	Q9Y5F6	944 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	MICAL3	Q7RTP6	2002 aa		11.88	□□□□□ -0.51
APTX-223	ENST00000479656	WDR5	P61964	334 aa	Known RBP	11.87	□□□□□ -0.51
APTX-223	ENST00000479656	TCEAL1	Q15170	157 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	PTPN20	Q4JDL3	420 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	PKDCC	Q504Y2	493 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	LIN9	Q5TKA1	542 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	SLC2A14	Q8TDB8	520 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	CPXM1	Q96SM3	734 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	RTP3	Q9BQQ7	232 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	SYT15	Q9BQS2	421 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	CRTAC1	Q9NQ79	661 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	TJP2	Q9UDY2	1190 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	DSE	Q9UL01	958 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	PCDHB8	Q9UN66	801 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	JRKL	Q9Y4A0	524 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	MYBPHL	A2RUH7	354 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	TULP2	O00295	520 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	CLDN5	O00501	218 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	TRAPPC3	O43617	180 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	BUB1B	O60566	1050 aa	Predicted RBP	11.87	□□□□□ -0.51
APTX-223	ENST00000479656	EFCAB14	O75071	495 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	FTCD	O95954	541 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	FGB	P02675	491 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	CALB1	P05937	261 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	SYN1	P17600	705 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	TKT	P29401	623 aa	Known RBP	11.87	□□□□□ -0.51
APTX-223	ENST00000479656	BCAR1	P56945	870 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	PTPRO	Q16827	1216 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	MDH1B	Q5I0G3	518 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	CYP4A22	Q5TCH4	519 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	OVOS1	Q6IE37	1185 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	ZNF365	Q70YC5	407 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	DAAM2	Q86T65	1068 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	LRRC43	Q8N309	656 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	LRRC57	Q8N9N7	239 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	ANKRD52	Q8NB46	1076 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms