RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ENGP17813 658 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 CNGA1P29973 690 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 CYP2C19P33261 490 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 GCLCP48506 637 aaPredicted RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 TCF15Q12870 199 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 BOP1Q14137 746 aaKnown RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 DAZAP2Q15038 168 aaPredicted RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 KHDC1Q4VXA5 237 aaKnown RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 PCID2Q5JVF3 399 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 PGM2L1Q6PCE3 622 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 NAPRTQ6XQN6 538 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 WDR53Q7Z5U6 358 aaPredicted RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 DTX2Q86UW9 622 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 CBARPQ8N350 705 aaPredicted RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 C8orf58Q8NAV2 365 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 C1orf43Q9BWL3 253 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 TINAGL1Q9GZM7 467 aaPredicted RBP4.32□□□□□ -1.72
HPS3-205ENST00000478525 DUSP22Q9NRW4 184 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 AFG3L2Q9Y4W6 797 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 RAD54BQ9Y620 910 aa4.32□□□□□ -1.72
HPS3-205ENST00000478525 FNDC1Q4ZHG4 1894 aaPredicted RBP4.31□□□□□ -1.72
HPS3-205ENST00000478525 H3BNC9 293 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 BCAR3O75815 825 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 MT-CO1P00395 513 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 VIL1P09327 827 aaKnown RBP4.31□□□□□ -1.72
HPS3-205ENST00000478525 RARBP10826 455 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 PHKA1P46020 1223 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 LINC00205P59089 165 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 KIF23Q02241 960 aaPredicted RBP4.31□□□□□ -1.72
HPS3-205ENST00000478525 LRRC41Q15345 812 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 PXDC1Q5TGL8 231 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 KRT26Q7Z3Y9 468 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 CNTD1Q8N815 330 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 CYP2W1Q8TAV3 490 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 COA7Q96BR5 231 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 ZC3H10Q96K80 434 aaKnown RBP4.31□□□□□ -1.72
HPS3-205ENST00000478525 ASB2Q96Q27 587 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 EBF3Q9H4W6 596 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 MAN1C1Q9NR34 630 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 TRNAU1APQ9NX07 287 aaKnown RBP4.31□□□□□ -1.72
HPS3-205ENST00000478525 MKS1Q9NXB0 559 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 SERPINB13Q9UIV8 391 aa4.31□□□□□ -1.72
HPS3-205ENST00000478525 PHLDB1Q86UU1 1377 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 LRRC14BA6NHZ5 514 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 E5RJQ4 531 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 SLC16A3O15427 465 aaKnown RBP4.3□□□□□ -1.72
HPS3-205ENST00000478525 PCDHGA12O60330 932 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 PIK3CGP48736 1102 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 PLCD1P51178 756 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 ZNF134P52741 427 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 SP2Q02086 613 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 DSC2Q02487 901 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 KIF22Q14807 665 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 TRIP6Q15654 476 aaKnown RBP4.3□□□□□ -1.72
HPS3-205ENST00000478525 TREML2Q5T2D2 321 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 TMEM108Q6UXF1 575 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 NOP9Q86U38 636 aaKnown RBP4.3□□□□□ -1.72
HPS3-205ENST00000478525 ZDHHC17Q8IUH5 632 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 NRACQ8N912 160 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 ATL2Q8NHH9 583 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 RITA1Q96K30 269 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 FSD1LQ9BXM9 530 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 GNL3LQ9NVN8 582 aaKnown RBP4.3□□□□□ -1.72
HPS3-205ENST00000478525 KLHL13Q9P2N7 655 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 PCDHGA9Q9Y5G4 932 aaKnown RBP4.3□□□□□ -1.72
HPS3-205ENST00000478525 PCDHGA8Q9Y5G5 932 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 PCDHGA7Q9Y5G6 932 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 PCDHGA6Q9Y5G7 932 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 PCDHGA3Q9Y5H0 932 aa4.3□□□□□ -1.72
HPS3-205ENST00000478525 CFAP20Q9Y6A4 193 aaKnown RBP4.3□□□□□ -1.72
HPS3-205ENST00000478525 CCDC187A0A096LP49 1063 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 M0QYG6 137 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 SOCS2O14508 198 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 TLR5O60602 858 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 PRDX5P30044 214 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 FXR1P51114 621 aaKnown RBP eCLIP4.29□□□□□ -1.72
HPS3-205ENST00000478525 HOXA4Q00056 320 aaPredicted RBP4.29□□□□□ -1.72
HPS3-205ENST00000478525 MIS18BP1Q6P0N0 1132 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 TRIM72Q6ZMU5 477 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 TTC7BQ86TV6 843 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 FAM90A1Q86YD7 464 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 LRRC71Q8N4P6 559 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 NANOGP1Q8N7R0 232 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 SPATA3Q8NHX4 192 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 ADAMTS15Q8TE58 950 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 TEKT5Q96M29 485 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 SIK2Q9H0K1 926 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 SERTAD3Q9UJW9 196 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 ADAMTS5Q9UNA0 930 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 SH2B3Q9UQQ2 575 aa4.29□□□□□ -1.72
HPS3-205ENST00000478525 WDR17Q8IZU2 1322 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 XPOTO43592 962 aaKnown RBP4.28□□□□□ -1.72
HPS3-205ENST00000478525 RPLP2P05387 115 aaKnown RBP4.28□□□□□ -1.72
HPS3-205ENST00000478525 FESP07332 822 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 HSD3B2P26439 372 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 SMARCA1P28370 1054 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 ICE2Q659A1 982 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 FCRL6Q6DN72 434 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 KIRREL2Q6UWL6 708 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms