RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 NCF2P19878 526 aaPredicted RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 BAG6P46379 1132 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 GDF10P55107 478 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 FKBP1CQ5VVH2 108 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 TMEM154Q6P9G4 183 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 CCDC125Q86Z20 511 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 RNF149Q8NC42 400 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 VTI1AQ96AJ9 217 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 FAF2Q96CS3 445 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 AGAP3Q96P47 875 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 TMEM8AQ9HCN3 771 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 JPH1Q9HDC5 661 aaPredicted RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 SLC17A6Q9P2U8 582 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 LAMA3Q16787 3333 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 SLX4Q8IY92 1834 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 TTLL13PA6NNM8 815 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 CYB561D2O14569 222 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 CFLARO15519 480 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 PYGBP11216 843 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 HSPA6P17066 643 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 GMPSP49915 693 aaPredicted RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 CDH6P55285 790 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 THOC5Q13769 683 aaKnown RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 CLEC16AQ2KHT3 1053 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 POLNQ7Z5Q5 900 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 FAM71AQ8IYT1 594 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 RNF148Q8N7C7 305 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 ART4Q93070 314 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 HEXIM2Q96MH2 286 aaKnown RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 TBC1D10AQ9BXI6 508 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 XPO7Q9UIA9 1087 aaKnown RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 NOCTQ9UK39 431 aaKnown RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 NUB1Q9Y5A7 615 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
CMC1-209ENST00000477739 MYO18AQ92614 2054 aaKnown RBP10.26□□□□□ -0.77
CMC1-209ENST00000477739 FAM237BA0A1B0GVD1 139 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 VWA5AO00534 786 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 CAPN9O14815 690 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SERPINB6P35237 376 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 GTF2A2P52657 109 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SESN2P58004 480 aaPredicted RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 GTF2BQ00403 316 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SWT1Q5T5J6 900 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 FAM102AQ5T9C2 384 aaPredicted RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 RASIP1Q5U651 963 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 TDRD10Q5VZ19 366 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 TRMT10CQ7L0Y3 403 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 BZW1Q7L1Q6 419 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 LMNTD2Q8IXW0 634 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 PTPRJQ12913 1337 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 MROH7Q68CQ1 1323 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SCN9AQ15858 1988 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 TCRBV7S3A2A0A539 114 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 P4HA2O15460 535 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ZNF862O60290 1169 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 PLA2G6O60733 806 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 HAUS5O94927 633 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 RBP3P10745 1247 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ETS2P15036 469 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 TAC1P20366 129 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 RFC5P40937 340 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ARFIP2P53365 341 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 CYP24A1Q07973 514 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 MGAT5Q09328 741 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 XRCC4Q13426 336 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 MYBPC2Q14324 1141 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 KPNB1Q14974 876 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 NFIL3Q16649 462 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 RAB6CQ53S08 254 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 C1orf220Q5T0J3 134 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SH3PXD2AQ5TCZ1 1133 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SPDYE1Q8NFV5 336 aaPredicted RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 SPATA18Q8TC71 538 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 HELQQ8TDG4 1101 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 FAM149B1Q96BN6 582 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ZNF570Q96NI8 536 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 RAB6CQ9H0N0 254 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ATP6V0A4Q9HBG4 840 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ANKEF1Q9NU02 776 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 TXLNGQ9NUQ3 528 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 DGKIO75912 1065 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 NUDT17P0C025 328 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 SARNPP82979 210 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 FSTL1Q12841 308 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 GJC2Q5T442 439 aaPredicted RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 ALYREFQ86V81 257 aaKnown RBP10.25□□□□□ -0.77
CMC1-209ENST00000477739 PDIK1LQ8N165 341 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 TMEM161BQ8NDZ6 487 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 MCPH1Q8NEM0 835 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 PAFAH2Q99487 392 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 ZNF408Q9H9D4 720 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 PCDHB2Q9Y5E7 798 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 NCANO14594 1321 aa10.25□□□□□ -0.77
CMC1-209ENST00000477739 TJP3O95049 919 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 TCN1P20061 433 aaPredicted RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 PGGT1BP53609 377 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms