RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 EDEM3Q9BZQ6 932 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 XPO4Q9C0E2 1151 aaKnown RBP10.5□□□□□ -0.73
NIFK-205ENST00000477693 NDST4Q9H3R1 872 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 POMKQ9H5K3 350 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 CD320Q9NPF0 282 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 AFF4Q9UHB7 1163 aaKnown RBP10.5□□□□□ -0.73
NIFK-205ENST00000477693 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.736e-6■■□□□ 13.3
NIFK-205ENST00000477693 ITIH6Q6UXX5 1313 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 SCN1AP35498 2009 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 CST3P01034 146 aaPredicted RBP10.49□□□□□ -0.73
NIFK-205ENST00000477693 AFPP02771 609 aaKnown RBP10.49□□□□□ -0.73
NIFK-205ENST00000477693 TPM1P09493 284 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 WEE2P0C1S8 567 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 CPB1P15086 417 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 EMP3P54852 163 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 GSDMDP57764 484 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 BFSP1Q12934 665 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 GPR17Q13304 367 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 DSG2Q14126 1118 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 HS1BP3Q53T59 392 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 FIGNQ5HY92 759 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 TMEM31Q5JXX7 168 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 PPM1LQ5SGD2 360 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 TDRD10Q5VZ19 366 aaKnown RBP10.49□□□□□ -0.73
NIFK-205ENST00000477693 WSCD1Q658N2 575 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 SPECC1LQ69YQ0 1117 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 CREBRFQ8IUR6 639 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 FMNL3Q8IVF7 1028 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 TCEAL8Q8IYN2 117 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 TMEM86AQ8N2M4 240 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 PDCL2Q8N4E4 241 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 TOP6BLQ8N6T0 577 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 OR10T2Q8NGX3 314 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 SMG7Q92540 1137 aaKnown RBP10.49□□□□□ -0.73
NIFK-205ENST00000477693 HPDLQ96IR7 371 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 FAM81BQ96LP2 452 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 ERGIC2Q96RQ1 377 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 RTP3Q9BQQ7 232 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 WDR6Q9NNW5 1121 aaKnown RBP10.49□□□□□ -0.73
NIFK-205ENST00000477693 L1RE1Q9UN81 338 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 USTQ9Y2C2 406 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 R3HCC1Q9Y3T6 440 aaKnown RBP10.49□□□□□ -0.73
NIFK-205ENST00000477693 NR2E1Q9Y466 385 aa10.49□□□□□ -0.73
NIFK-205ENST00000477693 MTCL1Q9Y4B5 1905 aaKnown RBP10.48□□□□□ -0.73
NIFK-205ENST00000477693 HUS1O60921 280 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 XYLBO75191 536 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 C4BPAP04003 597 aaKnown RBP10.48□□□□□ -0.73
NIFK-205ENST00000477693 OR4Q2P0C623 313 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 ATICP31939 592 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 ELF1P32519 619 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 SSTR3P32745 418 aaPredicted RBP10.48□□□□□ -0.73
NIFK-205ENST00000477693 VAMP7P51809 220 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 ARPP19P56211 112 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 DLG4P78352 724 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 UBXN1Q04323 297 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 ADCY1Q08828 1119 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 SMARCB1Q12824 385 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 SOWAHAQ2M3V2 549 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 ZACNQ401N2 412 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 C1orf220Q5T0J3 134 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 RNF19BQ6ZMZ0 732 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 DPH6Q7L8W6 267 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 VSTM4Q8IW00 320 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 DRC7Q8IY82 874 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 THEM5Q8N1Q8 247 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 ZCWPW1Q9H0M4 648 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 XYLT2Q9H1B5 865 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 NUCKS1Q9H1E3 243 aaKnown RBP10.48□□□□□ -0.73
NIFK-205ENST00000477693 VPS16Q9H269 839 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 HSFX1Q9UBD0 423 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 SNX9Q9Y5X1 595 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 CLUHO75153 1309 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 DENND4AQ7Z401 1863 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 CACNA1AO00555 2505 aa10.48□□□□□ -0.73
NIFK-205ENST00000477693 MTMR11A4FU01 709 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 C2CD4DB7Z1M9 353 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 PRRG1O14668 218 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 GABRDO14764 452 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 NRDCO43847 1150 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 SEC24AO95486 1093 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 VNN2O95498 520 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 FAM163BP0C2L3 166 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 RFX1P22670 979 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 PBX1P40424 430 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 LHX1P48742 406 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 KCNH2Q12809 1159 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 TRPC3Q13507 836 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 NCOA4Q13772 614 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 MIIPQ5JXC2 388 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 ALYREFQ86V81 257 aaKnown RBP10.47□□□□□ -0.73
NIFK-205ENST00000477693 ADGRF2Q8IZF7 708 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 TDRD5Q8NAT2 981 aaKnown RBP10.47□□□□□ -0.73
NIFK-205ENST00000477693 ZNF397Q8NF99 534 aaPredicted RBP10.47□□□□□ -0.73
NIFK-205ENST00000477693 C2orf15Q8WU43 125 aaKnown RBP10.47□□□□□ -0.73
NIFK-205ENST00000477693 KBTBD7Q8WVZ9 684 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 SLC35C1Q96A29 364 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 FAXDC2Q96IV6 333 aa10.47□□□□□ -0.73
NIFK-205ENST00000477693 RPGRIP1Q96KN7 1286 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms