RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TGFB2P61812 414 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 IRF5Q13568 498 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 MROH9Q5TGP6 573 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 KCNV1Q6PIU1 500 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 SYDE1Q6ZW31 735 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-204ENST00000477421 SMC1BQ8NDV3 1235 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 NSMCE1Q8WV22 266 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 FAM167BQ9BTA0 163 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 CEP41Q9BYV8 373 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 PORCNQ9H237 461 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 HES2Q9Y543 173 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 UMODL1Q5DID0 1318 aa11.56□□□□□ -0.56
COL27A1-204ENST00000477421 SRGAP2BP0DMP2 458 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 SERPINB6P35237 376 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 RFC1P35251 1148 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 ARFIP2P53365 341 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 TAS2R40P59535 323 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CENPCQ03188 943 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 PTPN11Q06124 597 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CAPSQ13938 189 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 ERO1BQ86YB8 467 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 NUDCD3Q8IVD9 361 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 FAM193BQ96PV7 902 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 OSMRQ99650 979 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 ROPN1BQ9BZX4 212 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 ROPN1Q9HAT0 212 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 SETD4Q9NVD3 440 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CRCPO75575 148 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 ADSSP30520 456 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CHKAP35790 457 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 NR1H3Q13133 447 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 DRP2Q13474 957 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CCNG2Q16589 344 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 ZACNQ401N2 412 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 FAM131BQ86XD5 332 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 FBXO36Q8NEA4 188 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 GPRC5AQ8NFJ5 357 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 RXFP2Q8WXD0 754 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 PGBD4Q96DM1 585 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 MTFR1LQ9H019 292 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 SMYD3Q9H7B4 428 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 DPP3Q9NY33 737 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 WDR35Q9P2L0 1181 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 TLK1Q9UKI8 766 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 R3HDM2Q9Y2K5 976 aaKnown RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 H3BRB1 525 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CFLARO15519 480 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 PSTPIP1O43586 416 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 TBC1D12O60347 775 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 BANF1O75531 89 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 SLC25A27O95847 323 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CST3P01034 146 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 GPD1P21695 349 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CPA2P48052 419 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 PTK7Q13308 1070 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 SNAPC2Q13487 334 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 TAF11Q15544 211 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 TREML2Q5T2D2 321 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 EEF1DP3Q658K8 133 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 CATSPERGQ6ZRH7 1159 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 SCUBE3Q8IX30 993 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 RYBPQ8N488 228 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 EXD1Q8NHP7 514 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 USP33Q8TEY7 942 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 MBOAT7Q96N66 472 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 SERPINB12Q96P63 405 aa11.55□□□□□ -0.56
COL27A1-204ENST00000477421 TUT1Q9H6E5 874 aaKnown RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 PSMC3IPQ9P2W1 217 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 GOLGA4Q13439 2230 aaKnown RBP11.55□□□□□ -0.56
COL27A1-204ENST00000477421 DCTN3O75935 186 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 AKAP5P24588 427 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 EPHB1P54762 984 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 KDSRQ06136 332 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 MAMLD1Q13495 774 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 MAP1SQ66K74 1059 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-204ENST00000477421 DUPD1Q68J44 220 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 OPTNQ96CV9 577 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 PCMTD2Q9NV79 361 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 NUP188Q5SRE5 1749 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 KLRG2A4D1S0 409 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-204ENST00000477421 CES2O00748 559 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 HAUS5O94927 633 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 TYK2P29597 1187 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 GARSP41250 739 aaKnown RBP11.54□□□□□ -0.56
COL27A1-204ENST00000477421 JAM2P57087 298 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 FOXR2Q6PJQ5 311 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 RSPH3Q86UC2 560 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 CRLF3Q8IUI8 442 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 C2orf69Q8N8R5 385 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 CCDC124Q96CT7 223 aaKnown RBP11.54□□□□□ -0.56
COL27A1-204ENST00000477421 FAM111AQ96PZ2 611 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 FAM129AQ9BZQ8 928 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 FHDC1Q9C0D6 1143 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-204ENST00000477421 CYP4F11Q9HBI6 524 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 WHRNQ9P202 907 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 USP18Q9UMW8 372 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 MAGEB2O15479 319 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms