RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 KRT1P04264 644 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 KRT10P13645 584 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 CD19P15391 556 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 HOXA11P31270 313 aaPredicted RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 CDKN2BP42772 138 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 CAV1Q03135 178 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 IFFO1Q0D2I5 559 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 TAZQ16635 292 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 CXCL16Q9H2A7 254 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 CDC42EP4Q9H3Q1 356 aaKnown RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 DDX56Q9NY93 547 aaKnown RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 SCN1AP35498 2009 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 SLC15A5A6NIM6 579 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 GPR32O75388 356 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 ATF2P15336 505 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 GPD2P43304 727 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 SSR1P43307 286 aaKnown RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 BYSLQ13895 437 aaKnown RBP12.14□□□□□ -0.47
NUP188-205ENST00000477069 SRLQ86TD4 932 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 CCDC114Q96M63 670 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 ACAP3Q96P50 834 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 TRAIPQ9BWF2 469 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 DPP3Q9NY33 737 aa12.14□□□□□ -0.47
NUP188-205ENST00000477069 BCCIPQ9P287 314 aaKnown RBP eCLIP12.14□□□□□ -0.47
NUP188-205ENST00000477069 LRCH4O75427 683 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 TJP3O95049 919 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 KRT3P12035 628 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 CYP3A5P20815 502 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 ZNF268Q14587 947 aaPredicted RBP12.13□□□□□ -0.47
NUP188-205ENST00000477069 TRIP13Q15645 432 aaPredicted RBP12.13□□□□□ -0.47
NUP188-205ENST00000477069 DCAF4L1Q3SXM0 396 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 RELL1Q8IUW5 271 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 WDR35Q9P2L0 1181 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
NUP188-205ENST00000477069 A6NJR5 290 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 F2P00734 622 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 HMGCRP04035 888 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 VDRP11473 427 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 P4HA1P13674 534 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 IL1R2P27930 398 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 PSMC1P62191 440 aaKnown RBP12.13□□□□□ -0.47
NUP188-205ENST00000477069 IRF5Q13568 498 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 OASLQ15646 514 aaKnown RBP12.13□□□□□ -0.47
NUP188-205ENST00000477069 CNGA2Q16280 664 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 MORN1Q5T089 497 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 CCDC89Q8N998 374 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 KAT2BQ92831 832 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 SCLT1Q96NL6 688 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 DDX23Q9BUQ8 820 aaKnown RBP12.13□□□□□ -0.47
NUP188-205ENST00000477069 ADAM7Q9H2U9 754 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 RSPH14Q9UHP6 348 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 DNPEPQ9ULA0 475 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
NUP188-205ENST00000477069 DERAQ9Y315 318 aa12.13□□□□□ -0.47
NUP188-205ENST00000477069 MBLAC1A4D2B0 266 aaPredicted RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 CCT5P48643 541 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 RBP5P82980 135 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 MFSD5Q6N075 450 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 HIBCHQ6NVY1 386 aaPredicted RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 CROCCP2Q86T23 111 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 ALLCQ8N6M5 410 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 EPS8L3Q8TE67 593 aaKnown RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 ACSF2Q96CM8 615 aaPredicted RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 METTL5Q9NRN9 209 aaKnown RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 SETD4Q9NVD3 440 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 DRG1Q9Y295 367 aaKnown RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 RRN3P2A6NIE6 340 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 GOLGA8SH3BPF8 625 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 PSMA2P25787 234 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 ADCY8P40145 1251 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 HIC1Q14526 733 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 ZBTB6Q15916 424 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 C6orf118Q5T5N4 469 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 GLIS1Q8NBF1 620 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 NKD2Q969F2 451 aaPredicted RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 SNX27Q96L92 541 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 ZMAT2Q96NC0 199 aaKnown RBP12.12□□□□□ -0.47
NUP188-205ENST00000477069 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 TSPYL1Q9H0U9 437 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 RABEP2Q9H5N1 569 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 PLEKHA5Q9HAU0 1116 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 EFR3BQ9Y2G0 817 aa12.12□□□□□ -0.47
NUP188-205ENST00000477069 M0QYV0 167 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 TULP2O00295 520 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 AGTP01019 485 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 PFKMP08237 780 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 SMIM10L2AP0DMW4 78 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 SMIM10L2BP0DMW5 78 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
NUP188-205ENST00000477069 CETN2P41208 172 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 MMP13P45452 471 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 NDST1P52848 882 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 ADAM17P78536 824 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 ALKAL1Q6UXT8 129 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 PRUNE1Q86TP1 453 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms