RNA–Protein interactions for RNA: ENST00000476729.5

FLOT1-209, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-209ENST00000476729 PXNP49023 591 aaPredicted RBP16.45■□□□□ 0.22
FLOT1-209ENST00000476729 CASP5P51878 434 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 POU5F1Q01860 360 aaKnown RBP16.45■□□□□ 0.22
FLOT1-209ENST00000476729 SMARCB1Q12824 385 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 BFSP1Q12934 665 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 CCINQ13939 588 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 L1TD1Q5T7N2 865 aaKnown RBP16.45■□□□□ 0.22
FLOT1-209ENST00000476729 TXNDC8Q6A555 127 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 PKN3Q6P5Z2 889 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 BRSK2Q8IWQ3 736 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 PDCL2Q8N4E4 241 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 TTC16Q8NEE8 873 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 USP13Q92995 863 aaPredicted RBP16.45■□□□□ 0.22
FLOT1-209ENST00000476729 RTKNQ9BST9 563 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 STRA6Q9BX79 667 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 FGFBP2Q9BYJ0 223 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 EBF3Q9H4W6 596 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 HPS4Q9NQG7 708 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 SEMA4GQ9NTN9 838 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 RBAKQ9NYW8 714 aaPredicted RBP16.45■□□□□ 0.22
FLOT1-209ENST00000476729 L1RE1Q9UN81 338 aa16.45■□□□□ 0.22
FLOT1-209ENST00000476729 SPTBN2O15020 2390 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 KRT19P08727 400 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 GAP43P17677 238 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 CNR2P34972 360 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 PNPLA4P41247 253 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 RUNX3Q13761 415 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 DDR2Q16832 855 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 CCDC142Q17RM4 750 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 SV2BQ7L1I2 683 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 NT5DC4Q86YG4 428 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 SYCP3Q8IZU3 236 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 C1orf127Q8N9H9 656 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 RIN3Q8TB24 985 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 MRPS31Q92665 395 aaKnown RBP16.44■□□□□ 0.22
FLOT1-209ENST00000476729 DNAJC19Q96DA6 116 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 PANK2Q9BZ23 570 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 DDX43Q9NXZ2 648 aaKnown RBP16.44■□□□□ 0.22
FLOT1-209ENST00000476729 SEL1LQ9UBV2 794 aa16.44■□□□□ 0.22
FLOT1-209ENST00000476729 NUP210Q8TEM1 1887 aaPredicted RBP16.44■□□□□ 0.22
FLOT1-209ENST00000476729 OTOL1A6NHN0 477 aaPredicted RBP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 HCRTO43612 131 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 HUS1O60921 280 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 ARSAP15289 507 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 CYP2F1P24903 491 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 TXLNAP40222 546 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 GRSF1Q12849 480 aaKnown RBP eCLIP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 NFE2Q16621 373 aaPredicted RBP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 INTS6LQ5JSJ4 861 aaKnown RBP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 FSTL4Q6MZW2 842 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 PRR23CQ6ZRP0 262 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 WDR5BQ86VZ2 330 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 OSTM1Q86WC4 334 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 SYNPOQ8N3V7 929 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 FAM160A2Q8N612 972 aaPredicted RBP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 CNTNAP3BQ96NU0 1288 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 FAM83CQ9BQN1 747 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 CBWD1Q9BRT8 395 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 CNTNAP3Q9BZ76 1288 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 PCIF1Q9H4Z3 704 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 TDP1Q9NUW8 608 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 POLR3BQ9NW08 1133 aaPredicted RBP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 SRPRBQ9Y5M8 271 aaKnown RBP16.43■□□□□ 0.22
FLOT1-209ENST00000476729 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
FLOT1-209ENST00000476729 GDF9O60383 454 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 PRPF6O94906 941 aaKnown RBP16.42■□□□□ 0.22
FLOT1-209ENST00000476729 CSH1P0DML2 217 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 CSH2P0DML3 217 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 DDX6P26196 483 aaKnown RBP eCLIP16.42■□□□□ 0.221e-13■■□□□ 11.6
FLOT1-209ENST00000476729 STAT6P42226 847 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 MYL7Q01449 175 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 RESTQ13127 1097 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 TMEM196Q5HYL7 178 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
FLOT1-209ENST00000476729 NAIF1Q69YI7 327 aaPredicted RBP16.42■□□□□ 0.22
FLOT1-209ENST00000476729 CC2D1AQ6P1N0 951 aaPredicted RBP16.42■□□□□ 0.22
FLOT1-209ENST00000476729 MON1AQ86VX9 555 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 NETO1Q8TDF5 533 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 CHFRQ96EP1 664 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 ACBD6Q9BR61 282 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 MTMR12Q9C0I1 747 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 PDE11AQ9HCR9 933 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 TRPC7Q9HCX4 862 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 ZMYM5Q9UJ78 669 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 GTF3C4Q9UKN8 822 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 PCDHB13Q9Y5F0 798 aa16.42■□□□□ 0.22
FLOT1-209ENST00000476729 A0A087X0B3 334 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 AXIN1O15169 862 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 LRP3O75074 770 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 TADA3O75528 432 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 LDHAP00338 332 aaKnown RBP16.41■□□□□ 0.22
FLOT1-209ENST00000476729 EGFP01133 1207 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 GARTP22102 1010 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 KCNA4P22459 653 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 RPL10AP62906 217 aaKnown RBP16.41■□□□□ 0.22
FLOT1-209ENST00000476729 CUL4AQ13619 759 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 CCDC6Q16204 474 aa16.41■□□□□ 0.22
FLOT1-209ENST00000476729 CSRP2Q16527 193 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms