RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 LRRC14Q15048 493 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 LRRC36Q1X8D7 754 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 ARMC4Q5T2S8 1044 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 HAUS6Q7Z4H7 955 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 C1orf54Q8WWF1 131 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 ANKRD36BP1Q96IX9 119 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 NSL1Q96IY1 281 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 PLEKHA8Q96JA3 519 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 ZFRQ96KR1 1074 aaKnown RBP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 CEP170P1Q96L14 293 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 PURBQ96QR8 312 aaKnown RBP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 OSBPL10Q9BXB5 764 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 RPAP3Q9H6T3 665 aaPredicted RBP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 COPG2Q9UBF2 871 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 PARP4Q9UKK3 1724 aaKnown RBP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 FAM47DPA6NHR8 397 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 CENPXA8MT69 81 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 TAF4O00268 1085 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 DDX3XO00571 662 aaKnown RBP eCLIP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 ATMINO43313 823 aaPredicted RBP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 RPS6KA5O75582 802 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 MFN2O95140 757 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 TMEM253P0C7T8 217 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 TYK2P29597 1187 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 EPHA7Q15375 998 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 SGSM1Q2NKQ1 1148 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 PCNX4Q63HM2 1172 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 BTN2A1Q7KYR7 527 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 SLC30A5Q8TAD4 765 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 ZNF564Q8TBZ8 553 aaPredicted RBP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 ACTRT1Q8TDG2 376 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 ASZ1Q8WWH4 475 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 SPATA17Q96L03 361 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 APOL4Q9BPW4 351 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 NUP85Q9BW27 656 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 QTRT2Q9H974 415 aaKnown RBP6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 TUFT1Q9NNX1 390 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 GDF3Q9NR23 364 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 SPATA2Q9UM82 520 aa6.37□□□□□ -1.39
HNRNPU-208ENST00000475997 SNTNA6NMZ2 147 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 RGS5O15539 181 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 FKBP6O75344 327 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 SRP72O76094 671 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 NOL4O94818 638 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 APOA4P06727 396 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 SLC29A2Q14542 456 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 TRIP4Q15650 581 aaPredicted RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 ARHGAP17Q68EM7 881 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 LDHDQ86WU2 507 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 JAMLQ86YT9 394 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 MICALL2Q8IY33 904 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 JADE3Q92613 823 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 CNKSR1Q969H4 720 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 TRAPPC9Q96Q05 1148 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 FAM129AQ9BZQ8 928 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 AGPAT3Q9NRZ7 376 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 C6orf203Q9P0P8 240 aaPredicted RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 LRCH1Q9Y2L9 728 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 SMAPO00193 183 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 AP3B1O00203 1094 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 EML1O00423 815 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 TRIM13O60858 407 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 PPP1R11O60927 126 aaPredicted RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 USP1O94782 785 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 P4HBP07237 508 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 ANXA13P27216 316 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 RECQLP46063 649 aaPredicted RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 SERPINB9P50453 376 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 PPIDQ08752 370 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 TFDP1Q14186 410 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 MAPRE1Q15691 268 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 COBLL1Q53SF7 1204 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 IQCKQ8N0W5 287 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 FBXO25Q8TCJ0 367 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 WDR60Q8WVS4 1066 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 JDP2Q8WYK2 163 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 ABHD8Q96I13 439 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 INPP4AQ96PE3 977 aaPredicted RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 OSBPL8Q9BZF1 889 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 TMBIM4Q9HC24 238 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 DBR1Q9UK59 544 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 LRRIQ4A6NIV6 560 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 ZNF197O14709 1029 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 BIRC5O15392 142 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 CHN1P15882 459 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 COMTP21964 271 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 SREBF1P36956 1147 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 TALDO1P37837 337 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 QARSP47897 775 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 SLC12A3P55017 1021 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 ADARP55265 1226 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 ITIH4Q14624 930 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 C16orf72Q14CZ0 275 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 ARSHQ5FYA8 562 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 HABP4Q5JVS0 413 aaKnown RBP6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 KRT74Q7RTS7 529 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 DEPDC7Q96QD5 511 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 WNT8AQ9H1J5 351 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 IKZF4Q9H2S9 585 aa6.36□□□□□ -1.39
HNRNPU-208ENST00000475997 RNPEPQ9H4A4 650 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms