RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 GTF3C4Q9UKN8 822 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 EXOC7Q9UPT5 735 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 NME7Q9Y5B8 376 aa7.56□□□□□ -1.2
HDAC3-207ENST00000475549 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 SPTLC2O15270 562 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 PPP6R2O75170 966 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 FGF19O95750 216 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 LDHAP00338 332 aaKnown RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 CST3P01034 146 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 CTHP32929 405 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 TXLNAP40222 546 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 PNPLA4P41247 253 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 KPNA1P52294 538 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 RBP5P82980 135 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 ZXDBP98169 803 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 EHHADHQ08426 723 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 SMARCB1Q12824 385 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 PKP1Q13835 747 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 CCINQ13939 588 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 SV2CQ496J9 727 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 INTS6LQ5JSJ4 861 aaKnown RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 FOXD4L5Q5VV16 416 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 NAIF1Q69YI7 327 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 TRIM68Q6AZZ1 485 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 CNNM4Q6P4Q7 775 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 PKN3Q6P5Z2 889 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 DCP1BQ8IZD4 617 aaKnown RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 GPD1LQ8N335 351 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 CELF5Q8N6W0 485 aaKnown RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 LRRC52Q8N7C0 313 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 MAB21L3Q8N8X9 362 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 ZNF507Q8TCN5 953 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 SPPL2BQ8TCT7 592 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 BPIFB1Q8TDL5 484 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 SCFD1Q8WVM8 642 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 ZNF516Q92618 1163 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 DHX58Q96C10 678 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 MYRFLQ96LU7 910 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 SLC22A12Q96S37 553 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 CYP2S1Q96SQ9 504 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 TMEM206Q9H813 350 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 PARD6AQ9NPB6 346 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 HPS4Q9NQG7 708 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 GKN1Q9NS71 199 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 DDX43Q9NXZ2 648 aaKnown RBP7.55□□□□□ -1.2
HDAC3-207ENST00000475549 DLL3Q9NYJ7 618 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 PCDHB5Q9Y5E4 795 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 SNX9Q9Y5X1 595 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 CACNA1AO00555 2505 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 F5P12259 2224 aa7.55□□□□□ -1.2
HDAC3-207ENST00000475549 MED19A0JLT2 244 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 HUS1O60921 280 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 PRPF40AO75400 957 aaKnown RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 KRT19P08727 400 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 CDC25CP30307 473 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 CXCL12P48061 93 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 USP46P62068 366 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 FOXK2Q01167 660 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 BFSP1Q12934 665 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 SRSF5Q13243 272 aaKnown RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 ALCAMQ13740 583 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 VEPH1Q14D04 833 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 PON2Q15165 354 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 STK38Q15208 465 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 LPAL2Q16609 132 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 NFE2Q16621 373 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 FOXD4L6Q3SYB3 417 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 CFAP221Q4G0U5 840 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 ARHGAP29Q52LW3 1261 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 ARHGAP15Q53QZ3 475 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 FOXD4L3Q6VB84 417 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 ERMP1Q7Z2K6 904 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 MON1AQ86VX9 555 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 RALGPS2Q86X27 583 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 CCDC65Q8IXS2 484 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 YAF2Q8IY57 180 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 SPEM1Q8N4L4 309 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 TOP6BLQ8N6T0 577 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 RDH13Q8NBN7 331 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 CSGALNACT1Q8TDX6 532 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 NOC3LQ8WTT2 800 aaKnown RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 EZH1Q92800 747 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 SNX21Q969T3 373 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 HPDLQ96IR7 371 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 ZNF560Q96MR9 790 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 C7orf25Q9BPX7 421 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 MRPL45Q9BRJ2 306 aaKnown RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 FAM126AQ9BYI3 521 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 BLZF1Q9H2G9 400 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 TNMDQ9H2S6 317 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 EBF3Q9H4W6 596 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 C8orf33Q9H7E9 229 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-207ENST00000475549 ABCB6Q9NP58 842 aa7.54□□□□□ -1.2
HDAC3-207ENST00000475549 CRTAC1Q9NQ79 661 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms