RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 ARID2Q68CP9 1835 aa15.28■□□□□ 0.04
ATG9A-220ENST00000475339 VWA3AA6NCI4 1184 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 ARHGAP6O43182 974 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 EDN1P05305 212 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 PDIA4P13667 645 aaKnown RBP15.27■□□□□ 0.04
ATG9A-220ENST00000475339 LIG1P18858 919 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 RPA1P27694 616 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 GJA4P35212 333 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 ALDH1A3P47895 512 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 BECN1Q14457 450 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 PDIA5Q14554 519 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 LYSMD4Q5XG99 296 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 SLCO6A1Q86UG4 719 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 CATSPER3Q86XQ3 398 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 MARCH9Q86YJ5 346 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 OLIG1Q8TAK6 271 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 PIP4K2CQ8TBX8 421 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 PIGOQ8TEQ8 1089 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 NACC1Q96RE7 527 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.04
ATG9A-220ENST00000475339 DACH1Q9UI36 760 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 TBX20Q9UMR3 447 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 CCL26Q9Y258 94 aa15.27■□□□□ 0.04
ATG9A-220ENST00000475339 ARHGEF35A5YM69 484 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 ANTXRLA6NF34 631 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 SOAT2O75908 522 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 SPATA31C1P0DKV0 1188 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 RARRES1P49788 294 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 ZRSR1Q15695 479 aaKnown RBP15.26■□□□□ 0.03
ATG9A-220ENST00000475339 ARL6IP4Q66PJ3 421 aaKnown RBP15.26■□□□□ 0.03
ATG9A-220ENST00000475339 CDCA2Q69YH5 1023 aaPredicted RBP15.26■□□□□ 0.03
ATG9A-220ENST00000475339 TOGARAM2Q6ZUX3 1019 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 ZBTB8OSQ8IWT0 167 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 SCUBE3Q8IX30 993 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 IGSF22Q8N9C0 903 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 APPL2Q8NEU8 664 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 DDX12PQ92771 950 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 CD101Q93033 1021 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 PSMG2Q969U7 264 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 SUSD3Q96L08 255 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 DCBLD2Q96PD2 775 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 CAPN10Q9HC96 672 aa15.26■□□□□ 0.03
ATG9A-220ENST00000475339 POLMQ9NP87 494 aaPredicted RBP15.26■□□□□ 0.03
ATG9A-220ENST00000475339 TNRC6BQ9UPQ9 1833 aaKnown RBP15.25■□□□□ 0.03
ATG9A-220ENST00000475339 A0A087WWV3 80 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 PP2D1A8MPX8 630 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 USO1O60763 962 aaKnown RBP15.25■□□□□ 0.03
ATG9A-220ENST00000475339 FGF19O95750 216 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 SERPINF2P08697 491 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.035e-15■■■■■ 80.1
ATG9A-220ENST00000475339 MUTP22033 750 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 P2RY2P41231 377 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 ABCG1P45844 678 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 SF3A1Q15459 793 aaKnown RBP15.25■□□□□ 0.03
ATG9A-220ENST00000475339 DUOXA1Q1HG43 343 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 C2orf27AQ580R0 203 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 PEAR1Q5VY43 1037 aaPredicted RBP15.25■□□□□ 0.03
ATG9A-220ENST00000475339 CCDC33Q8N5R6 958 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 TTC9BQ8N6N2 239 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 ATAD1Q8NBU5 361 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 RIN3Q8TB24 985 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 USP33Q8TEY7 942 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 EXOC4Q96A65 974 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 ZMAT2Q96NC0 199 aaKnown RBP15.25■□□□□ 0.03
ATG9A-220ENST00000475339 DNAAF2Q9NVR5 837 aaKnown RBP15.25■□□□□ 0.03
ATG9A-220ENST00000475339 APOBEC2Q9Y235 224 aaKnown RBP15.25■□□□□ 0.03
ATG9A-220ENST00000475339 ASB3Q9Y575 518 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 PTPRQQ9UMZ3 2332 aa15.25■□□□□ 0.03
ATG9A-220ENST00000475339 PTPRBP23467 1997 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 USP9XQ93008 2570 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 TRABD2BA6NFA1 517 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 ACKR2O00590 384 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 ARHGAP33O14559 1287 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 HNRNPLP14866 589 aaKnown RBP eCLIP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 MARCKSP29966 332 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 MCM4P33991 863 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 HOXD12P35452 270 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 DPP6P42658 865 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 SEC13P55735 322 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 CRY1Q16526 586 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 IL17AQ16552 155 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 DCAF4L1Q3SXM0 396 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 FOXD4L5Q5VV16 416 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 CENPPQ6IPU0 288 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 CMTM8Q8IZV2 173 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 DEFB119Q8N690 84 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 RASSF8Q8NHQ8 419 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 CEP76Q8TAP6 659 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 FOXD4L4Q8WXT5 416 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 USP13Q92995 863 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 SPACA7Q96KW9 195 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 IL21Q9HBE4 155 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 DDX19AQ9NUU7 478 aaKnown RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 SLC38A7Q9NVC3 462 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 KIAA1024Q9UPX6 916 aa15.24■□□□□ 0.03
ATG9A-220ENST00000475339 TIMM13Q9Y5L4 95 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-220ENST00000475339 PTPRDP23468 1912 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms