RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CRABP2P29373 138 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CDK7P50613 346 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 SP3Q02447 781 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 SFSWAPQ12872 951 aaKnown RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 DNAJC3Q13217 504 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 COL9A2Q14055 689 aaPredicted RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 RCN1Q15293 331 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 HIF1AQ16665 826 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CBWD6Q4V339 395 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 WDR44Q5JSH3 913 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CBWD3Q5JTY5 395 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CBWD5Q5RIA9 395 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 MFSD14BQ5SR56 506 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 ADGRD1Q6QNK2 874 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 DLK2Q6UY11 383 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 DPP8Q6V1X1 898 aaPredicted RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 POLNQ7Z5Q5 900 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 LRRC43Q8N309 656 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 SLC44A5Q8NCS7 719 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 RDM1Q8NG50 284 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 RNF217Q8TC41 542 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 PARD3BQ8TEW8 1205 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 SCG3Q8WXD2 468 aaKnown RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 GATA6Q92908 595 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 NKD2Q969F2 451 aaPredicted RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 UTP4Q969X6 686 aaKnown RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 C7orf26Q96N11 449 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 BTBD9Q96Q07 612 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 HAPLN3Q96S86 360 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 FAM167BQ9BTA0 163 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 RUSC1Q9BVN2 902 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 TSSK1BQ9BXA7 367 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 FGFBP2Q9BYJ0 223 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 ZNF518BQ9C0D4 1074 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 COA1Q9GZY4 146 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
CCDC93-208ENST00000474546 ACSS3Q9H6R3 686 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 ZWILCHQ9H900 591 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 CD209Q9NNX6 404 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 TIMMDC1Q9NPL8 285 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 PARVAQ9NVD7 372 aa8.43□□□□□ -1.06
CCDC93-208ENST00000474546 DYTNA2CJ06 578 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 USP17L10C9JJH3 530 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 F5H6K3 240 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 SPECC1L-ADORA2AF8WAN1 911 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 ATP9BO43861 1147 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PLA2G6O60733 806 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 ATP9AO75110 1047 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 SPAG7O75391 227 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PSMD10O75832 226 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 TMCC1O94876 653 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 KLHL2O95198 593 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 CALB1P05937 261 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PABPC4LP0CB38 370 aaKnown RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 RARBP10826 455 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 CNTFP26441 200 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 KLRC2P26717 231 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 EPHB2P29323 1055 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 FOXN2P32314 431 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PGM1P36871 562 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 MAGEA10P43363 369 aaPredicted RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 GMPSP49915 693 aaPredicted RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 AP3M2P53677 418 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 FKBP1AP62942 108 aaKnown RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 GTF2BQ00403 316 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 FMO1Q01740 532 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 MGAT5Q09328 741 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 HNRNPDQ14103 355 aaKnown RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 ACAP1Q15027 740 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 STXBP5Q5T5C0 1151 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 THEMIS2Q5TEJ8 643 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 SLFN13Q68D06 897 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PRR5LQ6MZQ0 368 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 CGB2Q6NT52 195 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 KLC3Q6P597 504 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 LVRNQ6Q4G3 990 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 FAM47EQ6ZV65 393 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 ARCQ7LC44 396 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PPIL6Q8IXY8 311 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 NIM1KQ8IY84 436 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 SCYL3Q8IZE3 742 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 MCOLN2Q8IZK6 566 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PDIK1LQ8N165 341 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 LRRC47Q8N1G4 583 aaKnown RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PPM1KQ8N3J5 372 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 ALLCQ8N6M5 410 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 TRPM4Q8TD43 1214 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 TRPC4APQ8TEL6 797 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 DDI1Q8WTU0 396 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PYROXD1Q8WU10 500 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 RPGRQ92834 1020 aaKnown RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 KCNN1Q92952 543 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 LENG9Q96B70 501 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 PTCD3Q96EY7 689 aaKnown RBP8.42□□□□□ -1.06
CCDC93-208ENST00000474546 SENP7Q9BQF6 1050 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 MAF1Q9H063 256 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 DEFB129Q9H1M3 183 aa8.42□□□□□ -1.06
CCDC93-208ENST00000474546 EPHX3Q9H6B9 360 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms