RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 MYCBPAPQ8TBZ2 947 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 C2orf15Q8WU43 125 aaKnown RBP11.13□□□□□ -0.63
VANGL1-205ENST00000474344 TWNKQ96RR1 684 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 ARID3AQ99856 593 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 LPIN3Q9BQK8 851 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 SYT15Q9BQS2 421 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 IMPG2Q9BZV3 1241 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 NAT10Q9H0A0 1025 aaKnown RBP11.13□□□□□ -0.63
VANGL1-205ENST00000474344 DPEP3Q9H4B8 488 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 SFXN1Q9H9B4 322 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 HMGXB4Q9UGU5 601 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 CDH22Q9UJ99 828 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 GTF3C4Q9UKN8 822 aa11.13□□□□□ -0.63
VANGL1-205ENST00000474344 HELZP42694 1942 aaKnown RBP11.13□□□□□ -0.63
VANGL1-205ENST00000474344 CAVIN2O95810 425 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 C8AP07357 584 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 HAPLN1P10915 354 aaPredicted RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 ATP1A3P13637 1013 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 SLC9A1P19634 815 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 ACO1P21399 889 aaKnown RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 PON1P27169 355 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 MAGEA11P43364 429 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 KCNQ1P51787 676 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 NDST1P52848 882 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 MRPS5P82675 430 aaKnown RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 TSPY1Q01534 308 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 CUL2Q13617 745 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 SMAD2Q15796 467 aaKnown RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 CLUL1Q15846 466 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 NFE2Q16621 373 aaPredicted RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 CFAP221Q4G0U5 840 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 WDR44Q5JSH3 913 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 RARS2Q5T160 578 aaKnown RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 PHLDB3Q6NSJ2 640 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 TRIM65Q6PJ69 517 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 TMC5Q6UXY8 1006 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 CCDC149Q6ZUS6 474 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 ARHGEF19Q8IW93 802 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 B3GALNT2Q8NCR0 500 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 OR6B3Q8NGW1 331 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 SPPL2BQ8TCT7 592 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 FUBP3Q96I24 572 aaKnown RBP eCLIP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 KREMEN1Q96MU8 473 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 PGLYRP2Q96PD5 576 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 ASB2Q96Q27 587 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 INTS2Q9H0H0 1204 aaKnown RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 CBX8Q9HC52 389 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 ABCB6Q9NP58 842 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 TMEM30AQ9NV96 361 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 MAGEC2Q9UBF1 373 aaPredicted RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 USP15Q9Y4E8 981 aaPredicted RBP11.12□□□□□ -0.63
VANGL1-205ENST00000474344 INSL5Q9Y5Q6 135 aa11.12□□□□□ -0.63
VANGL1-205ENST00000474344 A8MXQ7 604 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
VANGL1-205ENST00000474344 COPB1P53618 953 aaKnown RBP11.11□□□□□ -0.63
VANGL1-205ENST00000474344 ZNF445P59923 1031 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
VANGL1-205ENST00000474344 GCNT1Q02742 428 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 CETN1Q12798 172 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 EXOC3L4Q17RC7 722 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 AAK1Q2M2I8 961 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
VANGL1-205ENST00000474344 LIN9Q5TKA1 542 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 SMYD5Q6GMV2 418 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
VANGL1-205ENST00000474344 ELMSAN1Q6PJG2 1045 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 LRSAM1Q6UWE0 723 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 EP400NLQ6ZTU2 488 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.11□□□□□ -0.63
VANGL1-205ENST00000474344 TTC39CQ8N584 583 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 SLC4A11Q8NBS3 891 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 CCDC150Q8NCX0 1101 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 KAT5Q92993 513 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 PCED1BQ96HM7 432 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 NT5C1BQ96P26 610 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 APOL5Q9BWW9 433 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 LRRC3Q9BY71 257 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 B3GNT5Q9BYG0 378 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 CYP4F11Q9HBI6 524 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
VANGL1-205ENST00000474344 CISHQ9NSE2 258 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 TAB2Q9NYJ8 693 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 GCNT4Q9P109 453 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 CEP72Q9P209 647 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 SLC27A5Q9Y2P5 690 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 YIPF1Q9Y548 306 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 PCDHB5Q9Y5E4 795 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 MYOFQ9NZM1 2061 aa11.11□□□□□ -0.63
VANGL1-205ENST00000474344 KIF26AQ9ULI4 1882 aaPredicted RBP11.1□□□□□ -0.63
VANGL1-205ENST00000474344 SMTNL1A8MU46 457 aa11.1□□□□□ -0.63
VANGL1-205ENST00000474344 SOAT2O75908 522 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms