RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 IGKV3-20P01619 116 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 ZXDBP98169 803 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 RBM20Q5T481 1227 aaKnown RBP2.77□□□□□ -1.97
CCDC39-203ENST00000473854 SFRP4Q6FHJ7 346 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-203ENST00000473854 DEF8Q6ZN54 512 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 KCNK18Q7Z418 384 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 RSPH3Q86UC2 560 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 FAM109AQ8N4B1 249 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 ARFGAP1Q8N6T3 406 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 TMIEQ8NEW7 156 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 MPLKIPQ8TAP9 179 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 NINJ1Q92982 152 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 SCAMP4Q969E2 229 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 LRIG1Q96JA1 1093 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 FAM84BQ96KN1 310 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-203ENST00000473854 ZPBPQ9BS86 351 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 ERRFI1Q9UJM3 462 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-203ENST00000473854 HS3ST3B1Q9Y662 390 aa2.77□□□□□ -1.97
CCDC39-203ENST00000473854 TMEM232C9JQI7 657 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 RNF8O76064 485 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 ZNF585BQ52M93 769 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 ANO7Q6IWH7 933 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 ZNF549Q6P9A3 640 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 SERPINA13PQ6UXR4 307 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 PARS2Q7L3T8 475 aaKnown RBP2.76□□□□□ -1.97
CCDC39-203ENST00000473854 PDSS2Q86YH6 399 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 LRRC71Q8N4P6 559 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 DCBLD1Q8N8Z6 715 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 SH3TC2Q8TF17 1288 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 DNASE2BQ8WZ79 361 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 USP7Q93009 1102 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 CNPPD1Q9BV87 410 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 GJB4Q9NTQ9 266 aa2.76□□□□□ -1.97
CCDC39-203ENST00000473854 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.76□□□□□ -1.97
CCDC39-203ENST00000473854 ZEB2O60315 1214 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 A1BGP04217 495 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 DLDP09622 509 aaKnown RBP2.75□□□□□ -1.97
CCDC39-203ENST00000473854 ENGP17813 658 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 ID2Q02363 134 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 C4orf46Q504U0 113 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 CAPRIN2Q6IMN6 1127 aaKnown RBP2.75□□□□□ -1.97
CCDC39-203ENST00000473854 KIRREL2Q6UWL6 708 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 COLCA1Q6ZS62 124 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 PIP4P1Q86T03 277 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 ANKRD13BQ86YJ7 626 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 RHOT1Q8IXI2 618 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 NIM1KQ8IY84 436 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 CLRN3Q8NCR9 226 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 ABHD11Q8NFV4 315 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 TMX3Q96JJ7 454 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 FYTTD1Q96QD9 318 aaKnown RBP2.75□□□□□ -1.97
CCDC39-203ENST00000473854 SNX18Q96RF0 628 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 TDP1Q9NUW8 608 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 RLIMQ9NVW2 624 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 TFCP2L1Q9NZI6 479 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 DNM3Q9UQ16 869 aa2.75□□□□□ -1.97
CCDC39-203ENST00000473854 GOLGA8AA7E2F4 631 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 SLC28A2O43868 658 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 TJP3O95049 919 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 IL6RP08887 468 aaPredicted RBP2.74□□□□□ -1.97
CCDC39-203ENST00000473854 TNFRSF1BP20333 461 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 CDC25AP30304 524 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 PDE1AP54750 535 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 TPTEP56180 551 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 GPSM2P81274 684 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 CDC42EP1Q00587 391 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 FAPQ12884 760 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 RAB39AQ14964 217 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 DALRD3Q5D0E6 543 aaKnown RBP2.74□□□□□ -1.97
CCDC39-203ENST00000473854 TOR2AQ5JU69 321 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 ICE2Q659A1 982 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 FCRL6Q6DN72 434 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 SLC30A10Q6XR72 485 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 MIGA2Q7L4E1 593 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 RFX6Q8HWS3 928 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 TERB1Q8NA31 727 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 PSD4Q8NDX1 1056 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 FBXO41Q8TF61 875 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 SIGLEC11Q96RL6 698 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 TARS2Q9BW92 718 aaKnown RBP2.74□□□□□ -1.97
CCDC39-203ENST00000473854 OSBPL2Q9H1P3 480 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 IGSF5Q9NSI5 407 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 ETAA1Q9NY74 926 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 SAP30BPQ9UHR5 308 aaKnown RBP2.74□□□□□ -1.97
CCDC39-203ENST00000473854 APOBEC2Q9Y235 224 aaKnown RBP2.74□□□□□ -1.97
CCDC39-203ENST00000473854 PCDHGA2Q9Y5H1 932 aa2.74□□□□□ -1.97
CCDC39-203ENST00000473854 BTBD19C9JJ37 291 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 NTN3O00634 580 aaPredicted RBP2.73□□□□□ -1.97
CCDC39-203ENST00000473854 ACOT8O14734 319 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 PPM1DO15297 605 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 TLR2O60603 784 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 CNOT3O75175 753 aaKnown RBP2.73□□□□□ -1.97
CCDC39-203ENST00000473854 SBK3P0C264 359 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 BPIP17213 487 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 ZNF91Q05481 1191 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 DHCR24Q15392 516 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 TREML2Q5T2D2 321 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 TAF2Q6P1X5 1199 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 CUZD1Q86UP6 607 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 HOMER1Q86YM7 354 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms